Gene : Eucgr.B02256 E. grandis v2.0
Defline:  (1 of 4) KOG1397 - Ca2+/H+ antiporter VCX1 and related proteins Genomic Order:  1773
Name:  ? Eucgr.B02256 Secondary Identifier:  ? PAC:32061704
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.B02256 0.5kb upstream 0.5kb upstream 3917 true Chr02: 41690338-41694254 Eucalyptus grandis
Eucgr.B02256 0.5kb upstream 0.5kb upstream 500 false Chr02: 41690338-41690837 Eucalyptus grandis
Eucgr.B02256 0.5kb downstream 0.5kb downstream 3917 true Chr02: 41690838-41694754 Eucalyptus grandis
Eucgr.B02256 0.5kb downstream 0.5kb downstream 500 false Chr02: 41694255-41694754 Eucalyptus grandis
Eucgr.B02256 1.0kb upstream 1.0kb upstream 4417 true Chr02: 41689838-41694254 Eucalyptus grandis
Eucgr.B02256 1.0kb upstream 1.0kb upstream 1000 false Chr02: 41689838-41690837 Eucalyptus grandis
Eucgr.B02256 1.0kb downstream 1.0kb downstream 4417 true Chr02: 41690838-41695254 Eucalyptus grandis
Eucgr.B02256 1.0kb downstream 1.0kb downstream 1000 false Chr02: 41694255-41695254 Eucalyptus grandis
Eucgr.B02256 2.0kb upstream 2.0kb upstream 5417 true Chr02: 41688838-41694254 Eucalyptus grandis
Eucgr.B02256 2.0kb upstream 2.0kb upstream 2000 false Chr02: 41688838-41690837 Eucalyptus grandis
Eucgr.B02256 2.0kb downstream 2.0kb downstream 5417 true Chr02: 41690838-41696254 Eucalyptus grandis
Eucgr.B02256 2.0kb downstream 2.0kb downstream 2000 false Chr02: 41694255-41696254 Eucalyptus grandis
Eucgr.B02256 5.0kb upstream 5.0kb upstream 8417 true Chr02: 41685838-41694254 Eucalyptus grandis
Eucgr.B02256 5.0kb upstream 5.0kb upstream 5000 false Chr02: 41685838-41690837 Eucalyptus grandis
Eucgr.B02256 5.0kb downstream 5.0kb downstream 8417 true Chr02: 41690838-41699254 Eucalyptus grandis
Eucgr.B02256 5.0kb downstream 5.0kb downstream 5000 false Chr02: 41694255-41699254 Eucalyptus grandis
Eucgr.B02256 10.0kb upstream 10.0kb upstream 13417 true Chr02: 41680838-41694254 Eucalyptus grandis
Eucgr.B02256 10.0kb upstream 10.0kb upstream 10000 false Chr02: 41680838-41690837 Eucalyptus grandis
Eucgr.B02256 10.0kb downstream 10.0kb downstream 13417 true Chr02: 41690838-41704254 Eucalyptus grandis
Eucgr.B02256 10.0kb downstream 10.0kb downstream 10000 false Chr02: 41694255-41704254 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124071576 5270 Rosid View MSA
123745086 5271 Pentapetalae View MSA
122771361 5272 Eudicot View MSA
122048075 5273 Angiosperm View MSA
121310844 5274 Embryophyte View MSA
123427763 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.31481 0.0 17.3119    
cufflinks 2.70693 0.0 7.47248    
cufflinks 17.3245 0.0 39.6166    
cufflinks 42.7866 0.0 98.2336 High  
cufflinks 309.229 0.0 872.432 High High
cufflinks 2.42015 0.0 6.82382    

0 Strain