Gene : Eucgr.B03019 E. grandis v2.0
Defline:  (1 of 1) PTHR10621//PTHR10621:SF12 - UV EXCISION REPAIR PROTEIN RAD23 Genomic Order:  2350
Name:  ? Eucgr.B03019 Secondary Identifier:  ? PAC:32058345
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.B03019 0.5kb upstream 0.5kb upstream 8108 true Chr02: 50464336-50472443 Eucalyptus grandis
Eucgr.B03019 0.5kb upstream 0.5kb upstream 500 false Chr02: 50464336-50464835 Eucalyptus grandis
Eucgr.B03019 0.5kb downstream 0.5kb downstream 8108 true Chr02: 50464836-50472943 Eucalyptus grandis
Eucgr.B03019 0.5kb downstream 0.5kb downstream 500 false Chr02: 50472444-50472943 Eucalyptus grandis
Eucgr.B03019 1.0kb upstream 1.0kb upstream 8608 true Chr02: 50463836-50472443 Eucalyptus grandis
Eucgr.B03019 1.0kb upstream 1.0kb upstream 1000 false Chr02: 50463836-50464835 Eucalyptus grandis
Eucgr.B03019 1.0kb downstream 1.0kb downstream 8608 true Chr02: 50464836-50473443 Eucalyptus grandis
Eucgr.B03019 1.0kb downstream 1.0kb downstream 1000 false Chr02: 50472444-50473443 Eucalyptus grandis
Eucgr.B03019 2.0kb upstream 2.0kb upstream 9608 true Chr02: 50462836-50472443 Eucalyptus grandis
Eucgr.B03019 2.0kb upstream 2.0kb upstream 2000 false Chr02: 50462836-50464835 Eucalyptus grandis
Eucgr.B03019 2.0kb downstream 2.0kb downstream 9608 true Chr02: 50464836-50474443 Eucalyptus grandis
Eucgr.B03019 2.0kb downstream 2.0kb downstream 2000 false Chr02: 50472444-50474443 Eucalyptus grandis
Eucgr.B03019 5.0kb upstream 5.0kb upstream 12608 true Chr02: 50459836-50472443 Eucalyptus grandis
Eucgr.B03019 5.0kb upstream 5.0kb upstream 5000 false Chr02: 50459836-50464835 Eucalyptus grandis
Eucgr.B03019 5.0kb downstream 5.0kb downstream 12608 true Chr02: 50464836-50477443 Eucalyptus grandis
Eucgr.B03019 5.0kb downstream 5.0kb downstream 5000 false Chr02: 50472444-50477443 Eucalyptus grandis
Eucgr.B03019 10.0kb upstream 10.0kb upstream 17608 true Chr02: 50454836-50472443 Eucalyptus grandis
Eucgr.B03019 10.0kb upstream 10.0kb upstream 10000 false Chr02: 50454836-50464835 Eucalyptus grandis
Eucgr.B03019 10.0kb downstream 10.0kb downstream 17608 true Chr02: 50464836-50482443 Eucalyptus grandis
Eucgr.B03019 10.0kb downstream 10.0kb downstream 10000 false Chr02: 50472444-50482443 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040911 5273 Angiosperm View MSA
124061978 5270 Rosid View MSA
123736504 5271 Pentapetalae View MSA
122787573 5272 Eudicot View MSA
121350140 5274 Embryophyte View MSA
123423951 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 82.947 0.0 190.314 High High
cufflinks 83.6813 0.0 192.258 High High
cufflinks 70.7345 0.0 160.672 High  
cufflinks 70.6203 0.0 160.654 High  
cufflinks 69.3376 0.0 182.359 High  
cufflinks 76.1469 0.0 173.615 High  

0 Strain