Gene : Eucgr.B02675 E. grandis v2.0
Defline:  (1 of 1) 3.5.1.108 - UDP-3-O-acyl-N-acetylglucosamine deacetylase / UDP-3-O-acyl-GlcNAc deacetylase Genomic Order:  2183
Name:  ? Eucgr.B02675 Secondary Identifier:  ? PAC:32061202
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis NAGLIPASYN-PWY Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.B02675 0.5kb upstream 0.5kb upstream 7190 true Chr02: 47030759-47037948 Eucalyptus grandis
Eucgr.B02675 0.5kb upstream 0.5kb upstream 500 false Chr02: 47030759-47031258 Eucalyptus grandis
Eucgr.B02675 0.5kb downstream 0.5kb downstream 7190 true Chr02: 47031259-47038448 Eucalyptus grandis
Eucgr.B02675 0.5kb downstream 0.5kb downstream 500 false Chr02: 47037949-47038448 Eucalyptus grandis
Eucgr.B02675 1.0kb upstream 1.0kb upstream 7690 true Chr02: 47030259-47037948 Eucalyptus grandis
Eucgr.B02675 1.0kb upstream 1.0kb upstream 1000 false Chr02: 47030259-47031258 Eucalyptus grandis
Eucgr.B02675 1.0kb downstream 1.0kb downstream 7690 true Chr02: 47031259-47038948 Eucalyptus grandis
Eucgr.B02675 1.0kb downstream 1.0kb downstream 1000 false Chr02: 47037949-47038948 Eucalyptus grandis
Eucgr.B02675 2.0kb upstream 2.0kb upstream 8690 true Chr02: 47029259-47037948 Eucalyptus grandis
Eucgr.B02675 2.0kb upstream 2.0kb upstream 2000 false Chr02: 47029259-47031258 Eucalyptus grandis
Eucgr.B02675 2.0kb downstream 2.0kb downstream 8690 true Chr02: 47031259-47039948 Eucalyptus grandis
Eucgr.B02675 2.0kb downstream 2.0kb downstream 2000 false Chr02: 47037949-47039948 Eucalyptus grandis
Eucgr.B02675 5.0kb upstream 5.0kb upstream 11690 true Chr02: 47026259-47037948 Eucalyptus grandis
Eucgr.B02675 5.0kb upstream 5.0kb upstream 5000 false Chr02: 47026259-47031258 Eucalyptus grandis
Eucgr.B02675 5.0kb downstream 5.0kb downstream 11690 true Chr02: 47031259-47042948 Eucalyptus grandis
Eucgr.B02675 5.0kb downstream 5.0kb downstream 5000 false Chr02: 47037949-47042948 Eucalyptus grandis
Eucgr.B02675 10.0kb upstream 10.0kb upstream 16690 true Chr02: 47021259-47037948 Eucalyptus grandis
Eucgr.B02675 10.0kb upstream 10.0kb upstream 10000 false Chr02: 47021259-47031258 Eucalyptus grandis
Eucgr.B02675 10.0kb downstream 10.0kb downstream 16690 true Chr02: 47031259-47047948 Eucalyptus grandis
Eucgr.B02675 10.0kb downstream 10.0kb downstream 10000 false Chr02: 47037949-47047948 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124073632 5270 Rosid View MSA
123739136 5271 Pentapetalae View MSA
122793269 5272 Eudicot View MSA
122046520 5273 Angiosperm View MSA
121346728 5274 Embryophyte View MSA
123424011 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.08082 0.0 18.9298    
cufflinks 3.33105 0.0 8.7527   Low
cufflinks 13.8983 0.0 45.0038   High
cufflinks 8.27881 0.0 19.247    
cufflinks 4.72709 0.0 18.1655    
cufflinks 7.3893 0.0 17.5058    

0 Strain