Gene : Eucgr.B02657 E. grandis v2.0
Defline:  (1 of 5) PTHR10161 - TARTRATE-RESISTANT ACID PHOSPHATASE TYPE 5 Genomic Order:  2150
Name:  ? Eucgr.B02657 Secondary Identifier:  ? PAC:32058280
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis PWY-5083 Eucalyptus grandis pathologic  
Egrandis PWY-6348 Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.B02657 0.5kb upstream 0.5kb upstream 4460 true Chr02: 46533755-46538214 Eucalyptus grandis
Eucgr.B02657 0.5kb upstream 0.5kb upstream 500 false Chr02: 46533755-46534254 Eucalyptus grandis
Eucgr.B02657 0.5kb downstream 0.5kb downstream 4460 true Chr02: 46534255-46538714 Eucalyptus grandis
Eucgr.B02657 0.5kb downstream 0.5kb downstream 500 false Chr02: 46538215-46538714 Eucalyptus grandis
Eucgr.B02657 1.0kb upstream 1.0kb upstream 4960 true Chr02: 46533255-46538214 Eucalyptus grandis
Eucgr.B02657 1.0kb upstream 1.0kb upstream 1000 false Chr02: 46533255-46534254 Eucalyptus grandis
Eucgr.B02657 1.0kb downstream 1.0kb downstream 4960 true Chr02: 46534255-46539214 Eucalyptus grandis
Eucgr.B02657 1.0kb downstream 1.0kb downstream 1000 false Chr02: 46538215-46539214 Eucalyptus grandis
Eucgr.B02657 2.0kb upstream 2.0kb upstream 5960 true Chr02: 46532255-46538214 Eucalyptus grandis
Eucgr.B02657 2.0kb upstream 2.0kb upstream 2000 false Chr02: 46532255-46534254 Eucalyptus grandis
Eucgr.B02657 2.0kb downstream 2.0kb downstream 5960 true Chr02: 46534255-46540214 Eucalyptus grandis
Eucgr.B02657 2.0kb downstream 2.0kb downstream 2000 false Chr02: 46538215-46540214 Eucalyptus grandis
Eucgr.B02657 5.0kb upstream 5.0kb upstream 8960 true Chr02: 46529255-46538214 Eucalyptus grandis
Eucgr.B02657 5.0kb upstream 5.0kb upstream 5000 false Chr02: 46529255-46534254 Eucalyptus grandis
Eucgr.B02657 5.0kb downstream 5.0kb downstream 8960 true Chr02: 46534255-46543214 Eucalyptus grandis
Eucgr.B02657 5.0kb downstream 5.0kb downstream 5000 false Chr02: 46538215-46543214 Eucalyptus grandis
Eucgr.B02657 10.0kb upstream 10.0kb upstream 13960 true Chr02: 46524255-46538214 Eucalyptus grandis
Eucgr.B02657 10.0kb upstream 10.0kb upstream 10000 false Chr02: 46524255-46534254 Eucalyptus grandis
Eucgr.B02657 10.0kb downstream 10.0kb downstream 13960 true Chr02: 46534255-46548214 Eucalyptus grandis
Eucgr.B02657 10.0kb downstream 10.0kb downstream 10000 false Chr02: 46538215-46548214 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124061132 5270 Rosid View MSA
123743122 5271 Pentapetalae View MSA
122795933 5272 Eudicot View MSA
122045102 5273 Angiosperm View MSA
121351076 5274 Embryophyte View MSA
123427142 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.88108 0.0 6.47361    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 1.96977 0.0 6.59028    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 9.04099 0.0 23.9857   High
cufflinks 3.18206 0.0 9.45348    

0 Strain