Gene : Eucgr.B02588 E. grandis v2.0
Defline:  (1 of 1) PTHR10553//PTHR10553:SF9 - SMALL NUCLEAR RIBONUCLEOPROTEIN Genomic Order:  2083
Name:  ? Eucgr.B02588 Secondary Identifier:  ? PAC:32060802
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.B02588 0.5kb upstream 0.5kb upstream 2532 true Chr02: 45868278-45870809 Eucalyptus grandis
Eucgr.B02588 0.5kb upstream 0.5kb upstream 500 false Chr02: 45870310-45870809 Eucalyptus grandis
Eucgr.B02588 0.5kb downstream 0.5kb downstream 2532 true Chr02: 45867778-45870309 Eucalyptus grandis
Eucgr.B02588 0.5kb downstream 0.5kb downstream 500 false Chr02: 45867778-45868277 Eucalyptus grandis
Eucgr.B02588 1.0kb upstream 1.0kb upstream 3032 true Chr02: 45868278-45871309 Eucalyptus grandis
Eucgr.B02588 1.0kb upstream 1.0kb upstream 1000 false Chr02: 45870310-45871309 Eucalyptus grandis
Eucgr.B02588 1.0kb downstream 1.0kb downstream 3032 true Chr02: 45867278-45870309 Eucalyptus grandis
Eucgr.B02588 1.0kb downstream 1.0kb downstream 1000 false Chr02: 45867278-45868277 Eucalyptus grandis
Eucgr.B02588 2.0kb upstream 2.0kb upstream 4032 true Chr02: 45868278-45872309 Eucalyptus grandis
Eucgr.B02588 2.0kb upstream 2.0kb upstream 2000 false Chr02: 45870310-45872309 Eucalyptus grandis
Eucgr.B02588 2.0kb downstream 2.0kb downstream 4032 true Chr02: 45866278-45870309 Eucalyptus grandis
Eucgr.B02588 2.0kb downstream 2.0kb downstream 2000 false Chr02: 45866278-45868277 Eucalyptus grandis
Eucgr.B02588 5.0kb upstream 5.0kb upstream 7032 true Chr02: 45868278-45875309 Eucalyptus grandis
Eucgr.B02588 5.0kb upstream 5.0kb upstream 5000 false Chr02: 45870310-45875309 Eucalyptus grandis
Eucgr.B02588 5.0kb downstream 5.0kb downstream 7032 true Chr02: 45863278-45870309 Eucalyptus grandis
Eucgr.B02588 5.0kb downstream 5.0kb downstream 5000 false Chr02: 45863278-45868277 Eucalyptus grandis
Eucgr.B02588 10.0kb upstream 10.0kb upstream 12032 true Chr02: 45868278-45880309 Eucalyptus grandis
Eucgr.B02588 10.0kb upstream 10.0kb upstream 10000 false Chr02: 45870310-45880309 Eucalyptus grandis
Eucgr.B02588 10.0kb downstream 10.0kb downstream 12032 true Chr02: 45858278-45870309 Eucalyptus grandis
Eucgr.B02588 10.0kb downstream 10.0kb downstream 10000 false Chr02: 45858278-45868277 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124063734 5270 Rosid View MSA
123743762 5271 Pentapetalae View MSA
122792328 5272 Eudicot View MSA
122043124 5273 Angiosperm View MSA
121347194 5274 Embryophyte View MSA
123426460 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 122.561 0.0 309.018 High  
cufflinks 72.4232 0.0 163.534 High Low
cufflinks 104.842 0.0 270.855 High  
cufflinks 69.0998 0.0 172.133 High Low
cufflinks 126.489 0.0 318.333 High High
cufflinks 94.6391 0.0 233.979 High  

0 Strain