Gene : Eucgr.B02520 E. grandis v2.0
Defline:  (1 of 2) PTHR18952:SF111 - ALPHA CARBONIC ANHYDRASE 3 Genomic Order:  2019
Name:  ? Eucgr.B02520 Secondary Identifier:  ? PAC:32058121
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Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis CYANCAT-PWY Eucalyptus grandis pathologic  
Egrandis PWY-241 Eucalyptus grandis pathologic  
Egrandis PWY-7115 Eucalyptus grandis pathologic  
Egrandis PWY-7117 Eucalyptus grandis pathologic  
Egrandis PWYQT-4429 Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.B02520 0.5kb upstream 0.5kb upstream 2176 true Chr02: 45243435-45245610 Eucalyptus grandis
Eucgr.B02520 0.5kb upstream 0.5kb upstream 500 false Chr02: 45245111-45245610 Eucalyptus grandis
Eucgr.B02520 0.5kb downstream 0.5kb downstream 2176 true Chr02: 45242935-45245110 Eucalyptus grandis
Eucgr.B02520 0.5kb downstream 0.5kb downstream 500 false Chr02: 45242935-45243434 Eucalyptus grandis
Eucgr.B02520 1.0kb upstream 1.0kb upstream 2676 true Chr02: 45243435-45246110 Eucalyptus grandis
Eucgr.B02520 1.0kb upstream 1.0kb upstream 1000 false Chr02: 45245111-45246110 Eucalyptus grandis
Eucgr.B02520 1.0kb downstream 1.0kb downstream 2676 true Chr02: 45242435-45245110 Eucalyptus grandis
Eucgr.B02520 1.0kb downstream 1.0kb downstream 1000 false Chr02: 45242435-45243434 Eucalyptus grandis
Eucgr.B02520 2.0kb upstream 2.0kb upstream 3676 true Chr02: 45243435-45247110 Eucalyptus grandis
Eucgr.B02520 2.0kb upstream 2.0kb upstream 2000 false Chr02: 45245111-45247110 Eucalyptus grandis
Eucgr.B02520 2.0kb downstream 2.0kb downstream 3676 true Chr02: 45241435-45245110 Eucalyptus grandis
Eucgr.B02520 2.0kb downstream 2.0kb downstream 2000 false Chr02: 45241435-45243434 Eucalyptus grandis
Eucgr.B02520 5.0kb upstream 5.0kb upstream 6676 true Chr02: 45243435-45250110 Eucalyptus grandis
Eucgr.B02520 5.0kb upstream 5.0kb upstream 5000 false Chr02: 45245111-45250110 Eucalyptus grandis
Eucgr.B02520 5.0kb downstream 5.0kb downstream 6676 true Chr02: 45238435-45245110 Eucalyptus grandis
Eucgr.B02520 5.0kb downstream 5.0kb downstream 5000 false Chr02: 45238435-45243434 Eucalyptus grandis
Eucgr.B02520 10.0kb upstream 10.0kb upstream 11676 true Chr02: 45243435-45255110 Eucalyptus grandis
Eucgr.B02520 10.0kb upstream 10.0kb upstream 10000 false Chr02: 45245111-45255110 Eucalyptus grandis
Eucgr.B02520 10.0kb downstream 10.0kb downstream 11676 true Chr02: 45233435-45245110 Eucalyptus grandis
Eucgr.B02520 10.0kb downstream 10.0kb downstream 10000 false Chr02: 45233435-45243434 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124071031 5270 Rosid View MSA
123753559 5271 Pentapetalae View MSA
122795540 5272 Eudicot View MSA
122047303 5273 Angiosperm View MSA
121351630 5274 Embryophyte View MSA
123428273 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.205741 0.0 0.775176 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain