Gene : Eucgr.B03360 E. grandis v2.0
Defline:  (1 of 2) PTHR32285:SF57 - PROTEIN ALTERED XYLOGLUCAN 4 Genomic Order:  2613
Name:  ? Eucgr.B03360 Secondary Identifier:  ? PAC:32060086
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.B03360 0.5kb upstream 0.5kb upstream 2965 true Chr02: 53295484-53298448 Eucalyptus grandis
Eucgr.B03360 0.5kb upstream 0.5kb upstream 500 false Chr02: 53295484-53295983 Eucalyptus grandis
Eucgr.B03360 0.5kb downstream 0.5kb downstream 2965 true Chr02: 53295984-53298948 Eucalyptus grandis
Eucgr.B03360 0.5kb downstream 0.5kb downstream 500 false Chr02: 53298449-53298948 Eucalyptus grandis
Eucgr.B03360 1.0kb upstream 1.0kb upstream 3465 true Chr02: 53294984-53298448 Eucalyptus grandis
Eucgr.B03360 1.0kb upstream 1.0kb upstream 1000 false Chr02: 53294984-53295983 Eucalyptus grandis
Eucgr.B03360 1.0kb downstream 1.0kb downstream 3465 true Chr02: 53295984-53299448 Eucalyptus grandis
Eucgr.B03360 1.0kb downstream 1.0kb downstream 1000 false Chr02: 53298449-53299448 Eucalyptus grandis
Eucgr.B03360 2.0kb upstream 2.0kb upstream 4465 true Chr02: 53293984-53298448 Eucalyptus grandis
Eucgr.B03360 2.0kb upstream 2.0kb upstream 2000 false Chr02: 53293984-53295983 Eucalyptus grandis
Eucgr.B03360 2.0kb downstream 2.0kb downstream 4465 true Chr02: 53295984-53300448 Eucalyptus grandis
Eucgr.B03360 2.0kb downstream 2.0kb downstream 2000 false Chr02: 53298449-53300448 Eucalyptus grandis
Eucgr.B03360 5.0kb upstream 5.0kb upstream 7465 true Chr02: 53290984-53298448 Eucalyptus grandis
Eucgr.B03360 5.0kb upstream 5.0kb upstream 5000 false Chr02: 53290984-53295983 Eucalyptus grandis
Eucgr.B03360 5.0kb downstream 5.0kb downstream 7465 true Chr02: 53295984-53303448 Eucalyptus grandis
Eucgr.B03360 5.0kb downstream 5.0kb downstream 5000 false Chr02: 53298449-53303448 Eucalyptus grandis
Eucgr.B03360 10.0kb upstream 10.0kb upstream 12465 true Chr02: 53285984-53298448 Eucalyptus grandis
Eucgr.B03360 10.0kb upstream 10.0kb upstream 10000 false Chr02: 53285984-53295983 Eucalyptus grandis
Eucgr.B03360 10.0kb downstream 10.0kb downstream 12465 true Chr02: 53295984-53308448 Eucalyptus grandis
Eucgr.B03360 10.0kb downstream 10.0kb downstream 10000 false Chr02: 53298449-53308448 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124062757 5270 Rosid View MSA
123750797 5271 Pentapetalae View MSA
122786909 5272 Eudicot View MSA
122044387 5273 Angiosperm View MSA
121310287 5274 Embryophyte View MSA
123347814 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.17621 0.0 12.2734    
cufflinks 11.4428 0.0 25.6842    
cufflinks 3.13257 0.0 7.81913   Low
cufflinks 49.6761 0.0 112.012 High High
cufflinks 32.8385 0.0 72.9475    
cufflinks 12.219 0.0 27.2877    

0 Strain