Gene : Eucgr.B03376 E. grandis v2.0
Defline:  (1 of 2) PTHR31358:SF6 - F3I6.9 PROTEIN Genomic Order:  2598
Name:  ? Eucgr.B03376 Secondary Identifier:  ? PAC:32059222
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.B03376 0.5kb upstream 0.5kb upstream 4955 true Chr02: 53112712-53117666 Eucalyptus grandis
Eucgr.B03376 0.5kb upstream 0.5kb upstream 500 false Chr02: 53112712-53113211 Eucalyptus grandis
Eucgr.B03376 0.5kb downstream 0.5kb downstream 4955 true Chr02: 53113212-53118166 Eucalyptus grandis
Eucgr.B03376 0.5kb downstream 0.5kb downstream 500 false Chr02: 53117667-53118166 Eucalyptus grandis
Eucgr.B03376 1.0kb upstream 1.0kb upstream 5455 true Chr02: 53112212-53117666 Eucalyptus grandis
Eucgr.B03376 1.0kb upstream 1.0kb upstream 1000 false Chr02: 53112212-53113211 Eucalyptus grandis
Eucgr.B03376 1.0kb downstream 1.0kb downstream 5455 true Chr02: 53113212-53118666 Eucalyptus grandis
Eucgr.B03376 1.0kb downstream 1.0kb downstream 1000 false Chr02: 53117667-53118666 Eucalyptus grandis
Eucgr.B03376 2.0kb upstream 2.0kb upstream 6455 true Chr02: 53111212-53117666 Eucalyptus grandis
Eucgr.B03376 2.0kb upstream 2.0kb upstream 2000 false Chr02: 53111212-53113211 Eucalyptus grandis
Eucgr.B03376 2.0kb downstream 2.0kb downstream 6455 true Chr02: 53113212-53119666 Eucalyptus grandis
Eucgr.B03376 2.0kb downstream 2.0kb downstream 2000 false Chr02: 53117667-53119666 Eucalyptus grandis
Eucgr.B03376 5.0kb upstream 5.0kb upstream 9455 true Chr02: 53108212-53117666 Eucalyptus grandis
Eucgr.B03376 5.0kb upstream 5.0kb upstream 5000 false Chr02: 53108212-53113211 Eucalyptus grandis
Eucgr.B03376 5.0kb downstream 5.0kb downstream 9455 true Chr02: 53113212-53122666 Eucalyptus grandis
Eucgr.B03376 5.0kb downstream 5.0kb downstream 5000 false Chr02: 53117667-53122666 Eucalyptus grandis
Eucgr.B03376 10.0kb upstream 10.0kb upstream 14455 true Chr02: 53103212-53117666 Eucalyptus grandis
Eucgr.B03376 10.0kb upstream 10.0kb upstream 10000 false Chr02: 53103212-53113211 Eucalyptus grandis
Eucgr.B03376 10.0kb downstream 10.0kb downstream 14455 true Chr02: 53113212-53127666 Eucalyptus grandis
Eucgr.B03376 10.0kb downstream 10.0kb downstream 10000 false Chr02: 53117667-53127666 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124060962 5270 Rosid View MSA
123746894 5271 Pentapetalae View MSA
122791209 5272 Eudicot View MSA
122048552 5273 Angiosperm View MSA
121351484 5274 Embryophyte View MSA
123382183 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.44323 0.0 14.8495    
cufflinks 37.5023 0.0 87.9888   High
cufflinks 13.6804 0.0 30.6956    
cufflinks 10.1061 0.0 23.2838    
cufflinks 2.96284 0.0 7.42695   Low
cufflinks 9.92722 0.0 22.922    

0 Strain