Gene : Eucgr.B03243 E. grandis v2.0
Defline:  (1 of 6) PTHR31263:SF0 - CELLULASE (GLYCOSYL HYDROLASE FAMILY 5) PROTEIN-RELATED Genomic Order:  2717
Name:  ? Eucgr.B03243 Secondary Identifier:  ? PAC:32058078
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.B03243 0.5kb upstream 0.5kb upstream 4786 true Chr02: 54383224-54388009 Eucalyptus grandis
Eucgr.B03243 0.5kb upstream 0.5kb upstream 500 false Chr02: 54383224-54383723 Eucalyptus grandis
Eucgr.B03243 0.5kb downstream 0.5kb downstream 4786 true Chr02: 54383724-54388509 Eucalyptus grandis
Eucgr.B03243 0.5kb downstream 0.5kb downstream 500 false Chr02: 54388010-54388509 Eucalyptus grandis
Eucgr.B03243 1.0kb upstream 1.0kb upstream 5286 true Chr02: 54382724-54388009 Eucalyptus grandis
Eucgr.B03243 1.0kb upstream 1.0kb upstream 1000 false Chr02: 54382724-54383723 Eucalyptus grandis
Eucgr.B03243 1.0kb downstream 1.0kb downstream 5286 true Chr02: 54383724-54389009 Eucalyptus grandis
Eucgr.B03243 1.0kb downstream 1.0kb downstream 1000 false Chr02: 54388010-54389009 Eucalyptus grandis
Eucgr.B03243 2.0kb upstream 2.0kb upstream 6286 true Chr02: 54381724-54388009 Eucalyptus grandis
Eucgr.B03243 2.0kb upstream 2.0kb upstream 2000 false Chr02: 54381724-54383723 Eucalyptus grandis
Eucgr.B03243 2.0kb downstream 2.0kb downstream 6286 true Chr02: 54383724-54390009 Eucalyptus grandis
Eucgr.B03243 2.0kb downstream 2.0kb downstream 2000 false Chr02: 54388010-54390009 Eucalyptus grandis
Eucgr.B03243 5.0kb upstream 5.0kb upstream 9286 true Chr02: 54378724-54388009 Eucalyptus grandis
Eucgr.B03243 5.0kb upstream 5.0kb upstream 5000 false Chr02: 54378724-54383723 Eucalyptus grandis
Eucgr.B03243 5.0kb downstream 5.0kb downstream 9286 true Chr02: 54383724-54393009 Eucalyptus grandis
Eucgr.B03243 5.0kb downstream 5.0kb downstream 5000 false Chr02: 54388010-54393009 Eucalyptus grandis
Eucgr.B03243 10.0kb upstream 10.0kb upstream 14286 true Chr02: 54373724-54388009 Eucalyptus grandis
Eucgr.B03243 10.0kb upstream 10.0kb upstream 10000 false Chr02: 54373724-54383723 Eucalyptus grandis
Eucgr.B03243 10.0kb downstream 10.0kb downstream 14286 true Chr02: 54383724-54398009 Eucalyptus grandis
Eucgr.B03243 10.0kb downstream 10.0kb downstream 10000 false Chr02: 54388010-54398009 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122027175 5273 Angiosperm View MSA
124061714 5270 Rosid View MSA
123740079 5271 Pentapetalae View MSA
122789324 5272 Eudicot View MSA
121351116 5274 Embryophyte View MSA
123426514 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.97648 0.0 11.9969    
cufflinks 17.5847 0.0 39.0959   High
cufflinks 6.37753 0.0 15.0943    
cufflinks 7.39714 0.0 17.3195    
cufflinks 4.02523 0.0 9.95383   Low
cufflinks 10.3911 0.0 23.5072    

0 Strain