Gene : Eucgr.B03794 E. grandis v2.0
Defline:  (1 of 1) PTHR12162 - NIBRIN-RELATED Genomic Order:  3060
Name:  ? Eucgr.B03794 Secondary Identifier:  ? PAC:32061849
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.B03794 0.5kb upstream 0.5kb upstream 8445 true Chr02: 57352017-57360461 Eucalyptus grandis
Eucgr.B03794 0.5kb upstream 0.5kb upstream 500 false Chr02: 57352017-57352516 Eucalyptus grandis
Eucgr.B03794 0.5kb downstream 0.5kb downstream 8445 true Chr02: 57352517-57360961 Eucalyptus grandis
Eucgr.B03794 0.5kb downstream 0.5kb downstream 500 false Chr02: 57360462-57360961 Eucalyptus grandis
Eucgr.B03794 1.0kb upstream 1.0kb upstream 8945 true Chr02: 57351517-57360461 Eucalyptus grandis
Eucgr.B03794 1.0kb upstream 1.0kb upstream 1000 false Chr02: 57351517-57352516 Eucalyptus grandis
Eucgr.B03794 1.0kb downstream 1.0kb downstream 8945 true Chr02: 57352517-57361461 Eucalyptus grandis
Eucgr.B03794 1.0kb downstream 1.0kb downstream 1000 false Chr02: 57360462-57361461 Eucalyptus grandis
Eucgr.B03794 2.0kb upstream 2.0kb upstream 9945 true Chr02: 57350517-57360461 Eucalyptus grandis
Eucgr.B03794 2.0kb upstream 2.0kb upstream 2000 false Chr02: 57350517-57352516 Eucalyptus grandis
Eucgr.B03794 2.0kb downstream 2.0kb downstream 9945 true Chr02: 57352517-57362461 Eucalyptus grandis
Eucgr.B03794 2.0kb downstream 2.0kb downstream 2000 false Chr02: 57360462-57362461 Eucalyptus grandis
Eucgr.B03794 5.0kb upstream 5.0kb upstream 12945 true Chr02: 57347517-57360461 Eucalyptus grandis
Eucgr.B03794 5.0kb upstream 5.0kb upstream 5000 false Chr02: 57347517-57352516 Eucalyptus grandis
Eucgr.B03794 5.0kb downstream 5.0kb downstream 12945 true Chr02: 57352517-57365461 Eucalyptus grandis
Eucgr.B03794 5.0kb downstream 5.0kb downstream 5000 false Chr02: 57360462-57365461 Eucalyptus grandis
Eucgr.B03794 10.0kb upstream 10.0kb upstream 17945 true Chr02: 57342517-57360461 Eucalyptus grandis
Eucgr.B03794 10.0kb upstream 10.0kb upstream 10000 false Chr02: 57342517-57352516 Eucalyptus grandis
Eucgr.B03794 10.0kb downstream 10.0kb downstream 17945 true Chr02: 57352517-57370461 Eucalyptus grandis
Eucgr.B03794 10.0kb downstream 10.0kb downstream 10000 false Chr02: 57360462-57370461 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124064299 5270 Rosid View MSA
123737066 5271 Pentapetalae View MSA
122786000 5272 Eudicot View MSA
122047101 5273 Angiosperm View MSA
121349305 5274 Embryophyte View MSA
123381266 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.5947 0.0 9.21625    
cufflinks 4.75138 0.0 11.7146    
cufflinks 4.30635 0.0 10.7877    
cufflinks 2.57948 0.0 6.76568    
cufflinks 1.98374 0.0 5.35729   Low
cufflinks 4.40696 0.0 11.18    

0 Strain