Gene : Eucgr.B03798 E. grandis v2.0
Defline:  (1 of 1) PTHR23024//PTHR23024:SF189 - MEMBER OF 'GDXG' FAMILY OF LIPOLYTIC ENZYMES Genomic Order:  3064
Name:  ? Eucgr.B03798 Secondary Identifier:  ? PAC:32061842
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis PWY-6303 Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.B03798 0.5kb upstream 0.5kb upstream 1818 true Chr02: 57387450-57389267 Eucalyptus grandis
Eucgr.B03798 0.5kb upstream 0.5kb upstream 500 false Chr02: 57388768-57389267 Eucalyptus grandis
Eucgr.B03798 0.5kb downstream 0.5kb downstream 1818 true Chr02: 57386950-57388767 Eucalyptus grandis
Eucgr.B03798 0.5kb downstream 0.5kb downstream 500 false Chr02: 57386950-57387449 Eucalyptus grandis
Eucgr.B03798 1.0kb upstream 1.0kb upstream 2318 true Chr02: 57387450-57389767 Eucalyptus grandis
Eucgr.B03798 1.0kb upstream 1.0kb upstream 1000 false Chr02: 57388768-57389767 Eucalyptus grandis
Eucgr.B03798 1.0kb downstream 1.0kb downstream 2318 true Chr02: 57386450-57388767 Eucalyptus grandis
Eucgr.B03798 1.0kb downstream 1.0kb downstream 1000 false Chr02: 57386450-57387449 Eucalyptus grandis
Eucgr.B03798 2.0kb upstream 2.0kb upstream 3318 true Chr02: 57387450-57390767 Eucalyptus grandis
Eucgr.B03798 2.0kb upstream 2.0kb upstream 2000 false Chr02: 57388768-57390767 Eucalyptus grandis
Eucgr.B03798 2.0kb downstream 2.0kb downstream 3318 true Chr02: 57385450-57388767 Eucalyptus grandis
Eucgr.B03798 2.0kb downstream 2.0kb downstream 2000 false Chr02: 57385450-57387449 Eucalyptus grandis
Eucgr.B03798 5.0kb upstream 5.0kb upstream 6318 true Chr02: 57387450-57393767 Eucalyptus grandis
Eucgr.B03798 5.0kb upstream 5.0kb upstream 5000 false Chr02: 57388768-57393767 Eucalyptus grandis
Eucgr.B03798 5.0kb downstream 5.0kb downstream 6318 true Chr02: 57382450-57388767 Eucalyptus grandis
Eucgr.B03798 5.0kb downstream 5.0kb downstream 5000 false Chr02: 57382450-57387449 Eucalyptus grandis
Eucgr.B03798 10.0kb upstream 10.0kb upstream 11318 true Chr02: 57387450-57398767 Eucalyptus grandis
Eucgr.B03798 10.0kb upstream 10.0kb upstream 10000 false Chr02: 57388768-57398767 Eucalyptus grandis
Eucgr.B03798 10.0kb downstream 10.0kb downstream 11318 true Chr02: 57377450-57388767 Eucalyptus grandis
Eucgr.B03798 10.0kb downstream 10.0kb downstream 10000 false Chr02: 57377450-57387449 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124070947 5270 Rosid View MSA
123751656 5271 Pentapetalae View MSA
122793188 5272 Eudicot View MSA
122047300 5273 Angiosperm View MSA
123428915 5275 Viridiplantae View MSA
121350136 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.79434 0.0 7.7673    
cufflinks 2.55398 0.0 7.23324    
cufflinks 2.34579 0.0 6.71071    
cufflinks 1.38846 0.0 4.23397   Low
cufflinks 5.86606 0.0 15.3029   High
cufflinks 5.65768 0.0 14.525   High

0 Strain