Gene : Eucgr.B03712 E. grandis v2.0
Defline:  (1 of 1) PTHR13452:SF10 - THUMP DOMAIN-CONTAINING PROTEIN 1 Genomic Order:  2982
Name:  ? Eucgr.B03712 Secondary Identifier:  ? PAC:32061644
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.B03712 0.5kb upstream 0.5kb upstream 6620 true Chr02: 56810172-56816791 Eucalyptus grandis
Eucgr.B03712 0.5kb upstream 0.5kb upstream 500 false Chr02: 56810172-56810671 Eucalyptus grandis
Eucgr.B03712 0.5kb downstream 0.5kb downstream 6620 true Chr02: 56810672-56817291 Eucalyptus grandis
Eucgr.B03712 0.5kb downstream 0.5kb downstream 500 false Chr02: 56816792-56817291 Eucalyptus grandis
Eucgr.B03712 1.0kb upstream 1.0kb upstream 7120 true Chr02: 56809672-56816791 Eucalyptus grandis
Eucgr.B03712 1.0kb upstream 1.0kb upstream 1000 false Chr02: 56809672-56810671 Eucalyptus grandis
Eucgr.B03712 1.0kb downstream 1.0kb downstream 7120 true Chr02: 56810672-56817791 Eucalyptus grandis
Eucgr.B03712 1.0kb downstream 1.0kb downstream 1000 false Chr02: 56816792-56817791 Eucalyptus grandis
Eucgr.B03712 2.0kb upstream 2.0kb upstream 8120 true Chr02: 56808672-56816791 Eucalyptus grandis
Eucgr.B03712 2.0kb upstream 2.0kb upstream 2000 false Chr02: 56808672-56810671 Eucalyptus grandis
Eucgr.B03712 2.0kb downstream 2.0kb downstream 8120 true Chr02: 56810672-56818791 Eucalyptus grandis
Eucgr.B03712 2.0kb downstream 2.0kb downstream 2000 false Chr02: 56816792-56818791 Eucalyptus grandis
Eucgr.B03712 5.0kb upstream 5.0kb upstream 11120 true Chr02: 56805672-56816791 Eucalyptus grandis
Eucgr.B03712 5.0kb upstream 5.0kb upstream 5000 false Chr02: 56805672-56810671 Eucalyptus grandis
Eucgr.B03712 5.0kb downstream 5.0kb downstream 11120 true Chr02: 56810672-56821791 Eucalyptus grandis
Eucgr.B03712 5.0kb downstream 5.0kb downstream 5000 false Chr02: 56816792-56821791 Eucalyptus grandis
Eucgr.B03712 10.0kb upstream 10.0kb upstream 16120 true Chr02: 56800672-56816791 Eucalyptus grandis
Eucgr.B03712 10.0kb upstream 10.0kb upstream 10000 false Chr02: 56800672-56810671 Eucalyptus grandis
Eucgr.B03712 10.0kb downstream 10.0kb downstream 16120 true Chr02: 56810672-56826791 Eucalyptus grandis
Eucgr.B03712 10.0kb downstream 10.0kb downstream 10000 false Chr02: 56816792-56826791 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124062685 5270 Rosid View MSA
123737559 5271 Pentapetalae View MSA
122790815 5272 Eudicot View MSA
122045180 5273 Angiosperm View MSA
121346491 5274 Embryophyte View MSA
123424372 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 15.9579 0.0 36.7318    
cufflinks 10.1691 0.0 23.3838   Low
cufflinks 18.1555 0.0 41.3783    
cufflinks 11.3803 0.0 27.2966    
cufflinks 18.9262 0.0 48.2418   High
cufflinks 15.1755 0.0 35.0913    

0 Strain