Gene : Eucgr.B03672 E. grandis v2.0

Defline:  (1 of 3) PF07944 - Beta-L-arabinofuranosidase, GH127 (Glyco_hydro_127) Genomic Order:  2950
Name:  ? Eucgr.B03672 Secondary Identifier:  ? PAC:32062081

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.B03672 0.5kb upstream 0.5kb upstream 7468 true Chr02: 56448938-56456405 Eucalyptus grandis
Eucgr.B03672 0.5kb upstream 0.5kb upstream 500 false Chr02: 56455906-56456405 Eucalyptus grandis
Eucgr.B03672 0.5kb downstream 0.5kb downstream 7468 true Chr02: 56448438-56455905 Eucalyptus grandis
Eucgr.B03672 0.5kb downstream 0.5kb downstream 500 false Chr02: 56448438-56448937 Eucalyptus grandis
Eucgr.B03672 1.0kb upstream 1.0kb upstream 7968 true Chr02: 56448938-56456905 Eucalyptus grandis
Eucgr.B03672 1.0kb upstream 1.0kb upstream 1000 false Chr02: 56455906-56456905 Eucalyptus grandis
Eucgr.B03672 1.0kb downstream 1.0kb downstream 7968 true Chr02: 56447938-56455905 Eucalyptus grandis
Eucgr.B03672 1.0kb downstream 1.0kb downstream 1000 false Chr02: 56447938-56448937 Eucalyptus grandis
Eucgr.B03672 2.0kb upstream 2.0kb upstream 8968 true Chr02: 56448938-56457905 Eucalyptus grandis
Eucgr.B03672 2.0kb upstream 2.0kb upstream 2000 false Chr02: 56455906-56457905 Eucalyptus grandis
Eucgr.B03672 2.0kb downstream 2.0kb downstream 8968 true Chr02: 56446938-56455905 Eucalyptus grandis
Eucgr.B03672 2.0kb downstream 2.0kb downstream 2000 false Chr02: 56446938-56448937 Eucalyptus grandis
Eucgr.B03672 5.0kb upstream 5.0kb upstream 11968 true Chr02: 56448938-56460905 Eucalyptus grandis
Eucgr.B03672 5.0kb upstream 5.0kb upstream 5000 false Chr02: 56455906-56460905 Eucalyptus grandis
Eucgr.B03672 5.0kb downstream 5.0kb downstream 11968 true Chr02: 56443938-56455905 Eucalyptus grandis
Eucgr.B03672 5.0kb downstream 5.0kb downstream 5000 false Chr02: 56443938-56448937 Eucalyptus grandis
Eucgr.B03672 10.0kb upstream 10.0kb upstream 16968 true Chr02: 56448938-56465905 Eucalyptus grandis
Eucgr.B03672 10.0kb upstream 10.0kb upstream 10000 false Chr02: 56455906-56465905 Eucalyptus grandis
Eucgr.B03672 10.0kb downstream 10.0kb downstream 16968 true Chr02: 56438938-56455905 Eucalyptus grandis
Eucgr.B03672 10.0kb downstream 10.0kb downstream 10000 false Chr02: 56438938-56448937 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124065776 5270 Rosid View MSA
123744456 5271 Pentapetalae View MSA
122789821 5272 Eudicot View MSA
122047782 5273 Angiosperm View MSA
121347713 5274 Embryophyte View MSA
123428347 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 14.4744 0.0 36.5989    
cufflinks 22.6311 0.0 55.6468   High
cufflinks 11.5501 0.0 30.3775   Low
cufflinks 21.429 0.0 52.2306    
cufflinks 12.7354 0.0 29.597    
cufflinks 20.548 0.0 51.7192    

0 Strain