Gene : Eucgr.B03559 E. grandis v2.0
Defline:  (1 of 152) PF00847 - AP2 domain (AP2) Genomic Order:  2843
Name:  ? Eucgr.B03559 Secondary Identifier:  ? PAC:32061161
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.B03559 0.5kb upstream 0.5kb upstream 3526 true Chr02: 55495067-55498592 Eucalyptus grandis
Eucgr.B03559 0.5kb upstream 0.5kb upstream 500 false Chr02: 55495067-55495566 Eucalyptus grandis
Eucgr.B03559 0.5kb downstream 0.5kb downstream 3526 true Chr02: 55495567-55499092 Eucalyptus grandis
Eucgr.B03559 0.5kb downstream 0.5kb downstream 500 false Chr02: 55498593-55499092 Eucalyptus grandis
Eucgr.B03559 1.0kb upstream 1.0kb upstream 4026 true Chr02: 55494567-55498592 Eucalyptus grandis
Eucgr.B03559 1.0kb upstream 1.0kb upstream 1000 false Chr02: 55494567-55495566 Eucalyptus grandis
Eucgr.B03559 1.0kb downstream 1.0kb downstream 4026 true Chr02: 55495567-55499592 Eucalyptus grandis
Eucgr.B03559 1.0kb downstream 1.0kb downstream 1000 false Chr02: 55498593-55499592 Eucalyptus grandis
Eucgr.B03559 2.0kb upstream 2.0kb upstream 5026 true Chr02: 55493567-55498592 Eucalyptus grandis
Eucgr.B03559 2.0kb upstream 2.0kb upstream 2000 false Chr02: 55493567-55495566 Eucalyptus grandis
Eucgr.B03559 2.0kb downstream 2.0kb downstream 5026 true Chr02: 55495567-55500592 Eucalyptus grandis
Eucgr.B03559 2.0kb downstream 2.0kb downstream 2000 false Chr02: 55498593-55500592 Eucalyptus grandis
Eucgr.B03559 5.0kb upstream 5.0kb upstream 8026 true Chr02: 55490567-55498592 Eucalyptus grandis
Eucgr.B03559 5.0kb upstream 5.0kb upstream 5000 false Chr02: 55490567-55495566 Eucalyptus grandis
Eucgr.B03559 5.0kb downstream 5.0kb downstream 8026 true Chr02: 55495567-55503592 Eucalyptus grandis
Eucgr.B03559 5.0kb downstream 5.0kb downstream 5000 false Chr02: 55498593-55503592 Eucalyptus grandis
Eucgr.B03559 10.0kb upstream 10.0kb upstream 13026 true Chr02: 55485567-55498592 Eucalyptus grandis
Eucgr.B03559 10.0kb upstream 10.0kb upstream 10000 false Chr02: 55485567-55495566 Eucalyptus grandis
Eucgr.B03559 10.0kb downstream 10.0kb downstream 13026 true Chr02: 55495567-55508592 Eucalyptus grandis
Eucgr.B03559 10.0kb downstream 10.0kb downstream 10000 false Chr02: 55498593-55508592 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124066336 5270 Rosid View MSA
123738073 5271 Pentapetalae View MSA
122789741 5272 Eudicot View MSA
122050930 5273 Angiosperm View MSA
123428898 5275 Viridiplantae View MSA
121351000 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.91466 0.0 5.37436    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 2.61667 0.0 7.13862    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain