Gene : Eucgr.B03533 E. grandis v2.0
Defline:  (1 of 2) PTHR23336:SF7 - HISTIDINE KINASE-, DNA GYRASE B-, AND HSP90-LIKE ATPASE FAMILY PROTEIN-RELATED Genomic Order:  2819
Name:  ? Eucgr.B03533 Secondary Identifier:  ? PAC:32061873
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.B03533 0.5kb upstream 0.5kb upstream 7958 true Chr02: 55245314-55253271 Eucalyptus grandis
Eucgr.B03533 0.5kb upstream 0.5kb upstream 500 false Chr02: 55245314-55245813 Eucalyptus grandis
Eucgr.B03533 0.5kb downstream 0.5kb downstream 7958 true Chr02: 55245814-55253771 Eucalyptus grandis
Eucgr.B03533 0.5kb downstream 0.5kb downstream 500 false Chr02: 55253272-55253771 Eucalyptus grandis
Eucgr.B03533 1.0kb upstream 1.0kb upstream 8458 true Chr02: 55244814-55253271 Eucalyptus grandis
Eucgr.B03533 1.0kb upstream 1.0kb upstream 1000 false Chr02: 55244814-55245813 Eucalyptus grandis
Eucgr.B03533 1.0kb downstream 1.0kb downstream 8458 true Chr02: 55245814-55254271 Eucalyptus grandis
Eucgr.B03533 1.0kb downstream 1.0kb downstream 1000 false Chr02: 55253272-55254271 Eucalyptus grandis
Eucgr.B03533 2.0kb upstream 2.0kb upstream 9458 true Chr02: 55243814-55253271 Eucalyptus grandis
Eucgr.B03533 2.0kb upstream 2.0kb upstream 2000 false Chr02: 55243814-55245813 Eucalyptus grandis
Eucgr.B03533 2.0kb downstream 2.0kb downstream 9458 true Chr02: 55245814-55255271 Eucalyptus grandis
Eucgr.B03533 2.0kb downstream 2.0kb downstream 2000 false Chr02: 55253272-55255271 Eucalyptus grandis
Eucgr.B03533 5.0kb upstream 5.0kb upstream 12458 true Chr02: 55240814-55253271 Eucalyptus grandis
Eucgr.B03533 5.0kb upstream 5.0kb upstream 5000 false Chr02: 55240814-55245813 Eucalyptus grandis
Eucgr.B03533 5.0kb downstream 5.0kb downstream 12458 true Chr02: 55245814-55258271 Eucalyptus grandis
Eucgr.B03533 5.0kb downstream 5.0kb downstream 5000 false Chr02: 55253272-55258271 Eucalyptus grandis
Eucgr.B03533 10.0kb upstream 10.0kb upstream 17458 true Chr02: 55235814-55253271 Eucalyptus grandis
Eucgr.B03533 10.0kb upstream 10.0kb upstream 10000 false Chr02: 55235814-55245813 Eucalyptus grandis
Eucgr.B03533 10.0kb downstream 10.0kb downstream 17458 true Chr02: 55245814-55263271 Eucalyptus grandis
Eucgr.B03533 10.0kb downstream 10.0kb downstream 10000 false Chr02: 55253272-55263271 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124062343 5270 Rosid View MSA
123751040 5271 Pentapetalae View MSA
122793164 5272 Eudicot View MSA
122045083 5273 Angiosperm View MSA
121345114 5274 Embryophyte View MSA
123380160 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.726911 0.0 2.06289   High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.270067 0.0 0.856475 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.258913 0.0 0.832682 Low  

0 Strain