Gene : Eucgr.B03536 E. grandis v2.0
Defline:  (1 of 2) PTHR22958 - RELATED TO MULTIFUNCTIONAL CYCLIN-DEPENDENT KINASE-RELATED Genomic Order:  2822
Name:  ? Eucgr.B03536 Secondary Identifier:  ? PAC:32060830
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis PWY-7409 Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.B03536 0.5kb upstream 0.5kb upstream 3957 true Chr02: 55278975-55282931 Eucalyptus grandis
Eucgr.B03536 0.5kb upstream 0.5kb upstream 500 false Chr02: 55278975-55279474 Eucalyptus grandis
Eucgr.B03536 0.5kb downstream 0.5kb downstream 3957 true Chr02: 55279475-55283431 Eucalyptus grandis
Eucgr.B03536 0.5kb downstream 0.5kb downstream 500 false Chr02: 55282932-55283431 Eucalyptus grandis
Eucgr.B03536 1.0kb upstream 1.0kb upstream 4457 true Chr02: 55278475-55282931 Eucalyptus grandis
Eucgr.B03536 1.0kb upstream 1.0kb upstream 1000 false Chr02: 55278475-55279474 Eucalyptus grandis
Eucgr.B03536 1.0kb downstream 1.0kb downstream 4457 true Chr02: 55279475-55283931 Eucalyptus grandis
Eucgr.B03536 1.0kb downstream 1.0kb downstream 1000 false Chr02: 55282932-55283931 Eucalyptus grandis
Eucgr.B03536 2.0kb upstream 2.0kb upstream 5457 true Chr02: 55277475-55282931 Eucalyptus grandis
Eucgr.B03536 2.0kb upstream 2.0kb upstream 2000 false Chr02: 55277475-55279474 Eucalyptus grandis
Eucgr.B03536 2.0kb downstream 2.0kb downstream 5457 true Chr02: 55279475-55284931 Eucalyptus grandis
Eucgr.B03536 2.0kb downstream 2.0kb downstream 2000 false Chr02: 55282932-55284931 Eucalyptus grandis
Eucgr.B03536 5.0kb upstream 5.0kb upstream 8457 true Chr02: 55274475-55282931 Eucalyptus grandis
Eucgr.B03536 5.0kb upstream 5.0kb upstream 5000 false Chr02: 55274475-55279474 Eucalyptus grandis
Eucgr.B03536 5.0kb downstream 5.0kb downstream 8457 true Chr02: 55279475-55287931 Eucalyptus grandis
Eucgr.B03536 5.0kb downstream 5.0kb downstream 5000 false Chr02: 55282932-55287931 Eucalyptus grandis
Eucgr.B03536 10.0kb upstream 10.0kb upstream 13457 true Chr02: 55269475-55282931 Eucalyptus grandis
Eucgr.B03536 10.0kb upstream 10.0kb upstream 10000 false Chr02: 55269475-55279474 Eucalyptus grandis
Eucgr.B03536 10.0kb downstream 10.0kb downstream 13457 true Chr02: 55279475-55292931 Eucalyptus grandis
Eucgr.B03536 10.0kb downstream 10.0kb downstream 10000 false Chr02: 55282932-55292931 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124051086 5270 Rosid View MSA
123747785 5271 Pentapetalae View MSA
122794114 5272 Eudicot View MSA
122041847 5273 Angiosperm View MSA
123429151 5275 Viridiplantae View MSA
121351088 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.0479 0.0 3.01114    
cufflinks 11.6672 0.0 26.619   High
cufflinks 1.33611 0.0 3.73886    
cufflinks 4.97004 0.0 12.1886    
cufflinks 1.60714 0.0 4.40719    
cufflinks 2.40936 0.0 6.36148    

0 Strain