Gene : Eucgr.C00112 E. grandis v2.0
Defline:  (1 of 26) PF06203 - CCT motif (CCT) Genomic Order:  53
Name:  ? Eucgr.C00112 Secondary Identifier:  ? PAC:32039556
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.C00112 0.5kb upstream 0.5kb upstream 3646 true Chr03: 740299-743944 Eucalyptus grandis
Eucgr.C00112 0.5kb upstream 0.5kb upstream 500 false Chr03: 743445-743944 Eucalyptus grandis
Eucgr.C00112 0.5kb downstream 0.5kb downstream 3646 true Chr03: 739799-743444 Eucalyptus grandis
Eucgr.C00112 0.5kb downstream 0.5kb downstream 500 false Chr03: 739799-740298 Eucalyptus grandis
Eucgr.C00112 1.0kb upstream 1.0kb upstream 4146 true Chr03: 740299-744444 Eucalyptus grandis
Eucgr.C00112 1.0kb upstream 1.0kb upstream 1000 false Chr03: 743445-744444 Eucalyptus grandis
Eucgr.C00112 1.0kb downstream 1.0kb downstream 4146 true Chr03: 739299-743444 Eucalyptus grandis
Eucgr.C00112 1.0kb downstream 1.0kb downstream 1000 false Chr03: 739299-740298 Eucalyptus grandis
Eucgr.C00112 2.0kb upstream 2.0kb upstream 5146 true Chr03: 740299-745444 Eucalyptus grandis
Eucgr.C00112 2.0kb upstream 2.0kb upstream 2000 false Chr03: 743445-745444 Eucalyptus grandis
Eucgr.C00112 2.0kb downstream 2.0kb downstream 5146 true Chr03: 738299-743444 Eucalyptus grandis
Eucgr.C00112 2.0kb downstream 2.0kb downstream 2000 false Chr03: 738299-740298 Eucalyptus grandis
Eucgr.C00112 5.0kb upstream 5.0kb upstream 8146 true Chr03: 740299-748444 Eucalyptus grandis
Eucgr.C00112 5.0kb upstream 5.0kb upstream 5000 false Chr03: 743445-748444 Eucalyptus grandis
Eucgr.C00112 5.0kb downstream 5.0kb downstream 8146 true Chr03: 735299-743444 Eucalyptus grandis
Eucgr.C00112 5.0kb downstream 5.0kb downstream 5000 false Chr03: 735299-740298 Eucalyptus grandis
Eucgr.C00112 10.0kb upstream 10.0kb upstream 13146 true Chr03: 740299-753444 Eucalyptus grandis
Eucgr.C00112 10.0kb upstream 10.0kb upstream 10000 false Chr03: 743445-753444 Eucalyptus grandis
Eucgr.C00112 10.0kb downstream 10.0kb downstream 13146 true Chr03: 730299-743444 Eucalyptus grandis
Eucgr.C00112 10.0kb downstream 10.0kb downstream 10000 false Chr03: 730299-740298 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124066149 5270 Rosid View MSA
123741675 5271 Pentapetalae View MSA
122787863 5272 Eudicot View MSA
122044342 5273 Angiosperm View MSA
123428935 5275 Viridiplantae View MSA
121310281 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.34639 0.0 10.7073    
cufflinks 0.362109 0.0 1.1658 Low  
cufflinks 3.20759 0.0 8.1757    
cufflinks 0.115113 0.0 0.433715 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 32.8736 0.0 72.772   High

0 Strain