Gene : Eucgr.C00136 E. grandis v2.0
Defline:  (1 of 3) PTHR22835//PTHR22835:SF120 - ZINC FINGER FYVE DOMAIN CONTAINING PROTEIN Genomic Order:  75
Name:  ? Eucgr.C00136 Secondary Identifier:  ? PAC:32038677
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis LIPAS-PWY Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.C00136 0.5kb upstream 0.5kb upstream 3212 true Chr03: 970001-973212 Eucalyptus grandis
Eucgr.C00136 0.5kb upstream 0.5kb upstream 500 false Chr03: 972713-973212 Eucalyptus grandis
Eucgr.C00136 0.5kb downstream 0.5kb downstream 3212 true Chr03: 969501-972712 Eucalyptus grandis
Eucgr.C00136 0.5kb downstream 0.5kb downstream 500 false Chr03: 969501-970000 Eucalyptus grandis
Eucgr.C00136 1.0kb upstream 1.0kb upstream 3712 true Chr03: 970001-973712 Eucalyptus grandis
Eucgr.C00136 1.0kb upstream 1.0kb upstream 1000 false Chr03: 972713-973712 Eucalyptus grandis
Eucgr.C00136 1.0kb downstream 1.0kb downstream 3712 true Chr03: 969001-972712 Eucalyptus grandis
Eucgr.C00136 1.0kb downstream 1.0kb downstream 1000 false Chr03: 969001-970000 Eucalyptus grandis
Eucgr.C00136 2.0kb upstream 2.0kb upstream 4712 true Chr03: 970001-974712 Eucalyptus grandis
Eucgr.C00136 2.0kb upstream 2.0kb upstream 2000 false Chr03: 972713-974712 Eucalyptus grandis
Eucgr.C00136 2.0kb downstream 2.0kb downstream 4712 true Chr03: 968001-972712 Eucalyptus grandis
Eucgr.C00136 2.0kb downstream 2.0kb downstream 2000 false Chr03: 968001-970000 Eucalyptus grandis
Eucgr.C00136 5.0kb upstream 5.0kb upstream 7712 true Chr03: 970001-977712 Eucalyptus grandis
Eucgr.C00136 5.0kb upstream 5.0kb upstream 5000 false Chr03: 972713-977712 Eucalyptus grandis
Eucgr.C00136 5.0kb downstream 5.0kb downstream 7712 true Chr03: 965001-972712 Eucalyptus grandis
Eucgr.C00136 5.0kb downstream 5.0kb downstream 5000 false Chr03: 965001-970000 Eucalyptus grandis
Eucgr.C00136 10.0kb upstream 10.0kb upstream 12712 true Chr03: 970001-982712 Eucalyptus grandis
Eucgr.C00136 10.0kb upstream 10.0kb upstream 10000 false Chr03: 972713-982712 Eucalyptus grandis
Eucgr.C00136 10.0kb downstream 10.0kb downstream 12712 true Chr03: 960001-972712 Eucalyptus grandis
Eucgr.C00136 10.0kb downstream 10.0kb downstream 10000 false Chr03: 960001-970000 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124073778 5270 Rosid View MSA
123753785 5271 Pentapetalae View MSA
122797352 5272 Eudicot View MSA
122051674 5273 Angiosperm View MSA
121351762 5274 Embryophyte View MSA
123428079 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.223459 0.0 0.793528 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain