Gene : Eucgr.B03870 E. grandis v2.0
Defline:  (1 of 5) PTHR10593//PTHR10593:SF27 - SERINE/THREONINE-PROTEIN KINASE RIO Genomic Order:  3129
Name:  ? Eucgr.B03870 Secondary Identifier:  ? PAC:32058776
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.B03870 0.5kb upstream 0.5kb upstream 3593 true Chr02: 57926323-57929915 Eucalyptus grandis
Eucgr.B03870 0.5kb upstream 0.5kb upstream 500 false Chr02: 57926323-57926822 Eucalyptus grandis
Eucgr.B03870 0.5kb downstream 0.5kb downstream 3593 true Chr02: 57926823-57930415 Eucalyptus grandis
Eucgr.B03870 0.5kb downstream 0.5kb downstream 500 false Chr02: 57929916-57930415 Eucalyptus grandis
Eucgr.B03870 1.0kb upstream 1.0kb upstream 4093 true Chr02: 57925823-57929915 Eucalyptus grandis
Eucgr.B03870 1.0kb upstream 1.0kb upstream 1000 false Chr02: 57925823-57926822 Eucalyptus grandis
Eucgr.B03870 1.0kb downstream 1.0kb downstream 4093 true Chr02: 57926823-57930915 Eucalyptus grandis
Eucgr.B03870 1.0kb downstream 1.0kb downstream 1000 false Chr02: 57929916-57930915 Eucalyptus grandis
Eucgr.B03870 2.0kb upstream 2.0kb upstream 5093 true Chr02: 57924823-57929915 Eucalyptus grandis
Eucgr.B03870 2.0kb upstream 2.0kb upstream 2000 false Chr02: 57924823-57926822 Eucalyptus grandis
Eucgr.B03870 2.0kb downstream 2.0kb downstream 5093 true Chr02: 57926823-57931915 Eucalyptus grandis
Eucgr.B03870 2.0kb downstream 2.0kb downstream 2000 false Chr02: 57929916-57931915 Eucalyptus grandis
Eucgr.B03870 5.0kb upstream 5.0kb upstream 8093 true Chr02: 57921823-57929915 Eucalyptus grandis
Eucgr.B03870 5.0kb upstream 5.0kb upstream 5000 false Chr02: 57921823-57926822 Eucalyptus grandis
Eucgr.B03870 5.0kb downstream 5.0kb downstream 8093 true Chr02: 57926823-57934915 Eucalyptus grandis
Eucgr.B03870 5.0kb downstream 5.0kb downstream 5000 false Chr02: 57929916-57934915 Eucalyptus grandis
Eucgr.B03870 10.0kb upstream 10.0kb upstream 13093 true Chr02: 57916823-57929915 Eucalyptus grandis
Eucgr.B03870 10.0kb upstream 10.0kb upstream 10000 false Chr02: 57916823-57926822 Eucalyptus grandis
Eucgr.B03870 10.0kb downstream 10.0kb downstream 13093 true Chr02: 57926823-57939915 Eucalyptus grandis
Eucgr.B03870 10.0kb downstream 10.0kb downstream 10000 false Chr02: 57929916-57939915 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122027572 5273 Angiosperm View MSA
124060498 5270 Rosid View MSA
123741647 5271 Pentapetalae View MSA
122787233 5272 Eudicot View MSA
121297208 5274 Embryophyte View MSA
123428588 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.55524 0.0 6.76456    
cufflinks 51.4971 0.0 114.463 High  
cufflinks 1.44258 0.0 4.05717   Low
cufflinks 74.2585 0.0 167.212 High  
cufflinks 91.6153 0.0 209.014 High High
cufflinks 4.38045 0.0 10.9938    

0 Strain