Gene : Eucgr.B03842 E. grandis v2.0
Defline:  (1 of 8) PF11250 - Fantastic Four meristem regulator (FAF) Genomic Order:  3105
Name:  ? Eucgr.B03842 Secondary Identifier:  ? PAC:32058804
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.B03842 0.5kb upstream 0.5kb upstream 2096 true Chr02: 57717764-57719859 Eucalyptus grandis
Eucgr.B03842 0.5kb upstream 0.5kb upstream 500 false Chr02: 57717764-57718263 Eucalyptus grandis
Eucgr.B03842 0.5kb downstream 0.5kb downstream 2096 true Chr02: 57718264-57720359 Eucalyptus grandis
Eucgr.B03842 0.5kb downstream 0.5kb downstream 500 false Chr02: 57719860-57720359 Eucalyptus grandis
Eucgr.B03842 1.0kb upstream 1.0kb upstream 2596 true Chr02: 57717264-57719859 Eucalyptus grandis
Eucgr.B03842 1.0kb upstream 1.0kb upstream 1000 false Chr02: 57717264-57718263 Eucalyptus grandis
Eucgr.B03842 1.0kb downstream 1.0kb downstream 2596 true Chr02: 57718264-57720859 Eucalyptus grandis
Eucgr.B03842 1.0kb downstream 1.0kb downstream 1000 false Chr02: 57719860-57720859 Eucalyptus grandis
Eucgr.B03842 2.0kb upstream 2.0kb upstream 3596 true Chr02: 57716264-57719859 Eucalyptus grandis
Eucgr.B03842 2.0kb upstream 2.0kb upstream 2000 false Chr02: 57716264-57718263 Eucalyptus grandis
Eucgr.B03842 2.0kb downstream 2.0kb downstream 3596 true Chr02: 57718264-57721859 Eucalyptus grandis
Eucgr.B03842 2.0kb downstream 2.0kb downstream 2000 false Chr02: 57719860-57721859 Eucalyptus grandis
Eucgr.B03842 5.0kb upstream 5.0kb upstream 6596 true Chr02: 57713264-57719859 Eucalyptus grandis
Eucgr.B03842 5.0kb upstream 5.0kb upstream 5000 false Chr02: 57713264-57718263 Eucalyptus grandis
Eucgr.B03842 5.0kb downstream 5.0kb downstream 6596 true Chr02: 57718264-57724859 Eucalyptus grandis
Eucgr.B03842 5.0kb downstream 5.0kb downstream 5000 false Chr02: 57719860-57724859 Eucalyptus grandis
Eucgr.B03842 10.0kb upstream 10.0kb upstream 11596 true Chr02: 57708264-57719859 Eucalyptus grandis
Eucgr.B03842 10.0kb upstream 10.0kb upstream 10000 false Chr02: 57708264-57718263 Eucalyptus grandis
Eucgr.B03842 10.0kb downstream 10.0kb downstream 11596 true Chr02: 57718264-57729859 Eucalyptus grandis
Eucgr.B03842 10.0kb downstream 10.0kb downstream 10000 false Chr02: 57719860-57729859 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124069598 5270 Rosid View MSA
123752468 5271 Pentapetalae View MSA
122797002 5272 Eudicot View MSA
122048900 5273 Angiosperm View MSA
121311160 5274 Embryophyte View MSA
123348494 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.93529 0.0 5.49215    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.774478 0.0 2.45613    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 5.01532 0.0 12.8758   High

0 Strain