Gene : Eucgr.B03813 E. grandis v2.0
Defline:  (1 of 1) 6.5.1.4 - RNA 3'-terminal-phosphate cyclase (ATP) / RNA-3'-phosphate cyclase Genomic Order:  3078
Name:  ? Eucgr.B03813 Secondary Identifier:  ? PAC:32058311
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.B03813 0.5kb upstream 0.5kb upstream 10707 true Chr02: 57532666-57543372 Eucalyptus grandis
Eucgr.B03813 0.5kb upstream 0.5kb upstream 500 false Chr02: 57532666-57533165 Eucalyptus grandis
Eucgr.B03813 0.5kb downstream 0.5kb downstream 10707 true Chr02: 57533166-57543872 Eucalyptus grandis
Eucgr.B03813 0.5kb downstream 0.5kb downstream 500 false Chr02: 57543373-57543872 Eucalyptus grandis
Eucgr.B03813 1.0kb upstream 1.0kb upstream 11207 true Chr02: 57532166-57543372 Eucalyptus grandis
Eucgr.B03813 1.0kb upstream 1.0kb upstream 1000 false Chr02: 57532166-57533165 Eucalyptus grandis
Eucgr.B03813 1.0kb downstream 1.0kb downstream 11207 true Chr02: 57533166-57544372 Eucalyptus grandis
Eucgr.B03813 1.0kb downstream 1.0kb downstream 1000 false Chr02: 57543373-57544372 Eucalyptus grandis
Eucgr.B03813 2.0kb upstream 2.0kb upstream 12207 true Chr02: 57531166-57543372 Eucalyptus grandis
Eucgr.B03813 2.0kb upstream 2.0kb upstream 2000 false Chr02: 57531166-57533165 Eucalyptus grandis
Eucgr.B03813 2.0kb downstream 2.0kb downstream 12207 true Chr02: 57533166-57545372 Eucalyptus grandis
Eucgr.B03813 2.0kb downstream 2.0kb downstream 2000 false Chr02: 57543373-57545372 Eucalyptus grandis
Eucgr.B03813 5.0kb upstream 5.0kb upstream 15207 true Chr02: 57528166-57543372 Eucalyptus grandis
Eucgr.B03813 5.0kb upstream 5.0kb upstream 5000 false Chr02: 57528166-57533165 Eucalyptus grandis
Eucgr.B03813 5.0kb downstream 5.0kb downstream 15207 true Chr02: 57533166-57548372 Eucalyptus grandis
Eucgr.B03813 5.0kb downstream 5.0kb downstream 5000 false Chr02: 57543373-57548372 Eucalyptus grandis
Eucgr.B03813 10.0kb upstream 10.0kb upstream 20207 true Chr02: 57523166-57543372 Eucalyptus grandis
Eucgr.B03813 10.0kb upstream 10.0kb upstream 10000 false Chr02: 57523166-57533165 Eucalyptus grandis
Eucgr.B03813 10.0kb downstream 10.0kb downstream 20207 true Chr02: 57533166-57553372 Eucalyptus grandis
Eucgr.B03813 10.0kb downstream 10.0kb downstream 10000 false Chr02: 57543373-57553372 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026420 5273 Angiosperm View MSA
124066416 5270 Rosid View MSA
123740049 5271 Pentapetalae View MSA
122791939 5272 Eudicot View MSA
121344300 5274 Embryophyte View MSA
123427148 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.2146 0.0 28.721    
cufflinks 5.8038 0.0 14.0599   Low
cufflinks 11.9381 0.0 28.4033    
cufflinks 7.97307 0.0 18.5997    
cufflinks 5.84036 0.0 14.1065   Low
cufflinks 14.7407 0.0 34.0362   High

0 Strain