Gene : Eucgr.C00422 E. grandis v2.0
Defline:  (1 of 1) PTHR10766:SF54 - ENDOMEMBRANE FAMILY PROTEIN 70 Genomic Order:  302
Name:  ? Eucgr.C00422 Secondary Identifier:  ? PAC:32036029
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.C00422 0.5kb upstream 0.5kb upstream 3261 true Chr03: 6652947-6656207 Eucalyptus grandis
Eucgr.C00422 0.5kb upstream 0.5kb upstream 500 false Chr03: 6655708-6656207 Eucalyptus grandis
Eucgr.C00422 0.5kb downstream 0.5kb downstream 3261 true Chr03: 6652447-6655707 Eucalyptus grandis
Eucgr.C00422 0.5kb downstream 0.5kb downstream 500 false Chr03: 6652447-6652946 Eucalyptus grandis
Eucgr.C00422 1.0kb upstream 1.0kb upstream 3761 true Chr03: 6652947-6656707 Eucalyptus grandis
Eucgr.C00422 1.0kb upstream 1.0kb upstream 1000 false Chr03: 6655708-6656707 Eucalyptus grandis
Eucgr.C00422 1.0kb downstream 1.0kb downstream 3761 true Chr03: 6651947-6655707 Eucalyptus grandis
Eucgr.C00422 1.0kb downstream 1.0kb downstream 1000 false Chr03: 6651947-6652946 Eucalyptus grandis
Eucgr.C00422 2.0kb upstream 2.0kb upstream 4761 true Chr03: 6652947-6657707 Eucalyptus grandis
Eucgr.C00422 2.0kb upstream 2.0kb upstream 2000 false Chr03: 6655708-6657707 Eucalyptus grandis
Eucgr.C00422 2.0kb downstream 2.0kb downstream 4761 true Chr03: 6650947-6655707 Eucalyptus grandis
Eucgr.C00422 2.0kb downstream 2.0kb downstream 2000 false Chr03: 6650947-6652946 Eucalyptus grandis
Eucgr.C00422 5.0kb upstream 5.0kb upstream 7761 true Chr03: 6652947-6660707 Eucalyptus grandis
Eucgr.C00422 5.0kb upstream 5.0kb upstream 5000 false Chr03: 6655708-6660707 Eucalyptus grandis
Eucgr.C00422 5.0kb downstream 5.0kb downstream 7761 true Chr03: 6647947-6655707 Eucalyptus grandis
Eucgr.C00422 5.0kb downstream 5.0kb downstream 5000 false Chr03: 6647947-6652946 Eucalyptus grandis
Eucgr.C00422 10.0kb upstream 10.0kb upstream 12761 true Chr03: 6652947-6665707 Eucalyptus grandis
Eucgr.C00422 10.0kb upstream 10.0kb upstream 10000 false Chr03: 6655708-6665707 Eucalyptus grandis
Eucgr.C00422 10.0kb downstream 10.0kb downstream 12761 true Chr03: 6642947-6655707 Eucalyptus grandis
Eucgr.C00422 10.0kb downstream 10.0kb downstream 10000 false Chr03: 6642947-6652946 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124063523 5270 Rosid View MSA
123747213 5271 Pentapetalae View MSA
122787756 5272 Eudicot View MSA
122045331 5273 Angiosperm View MSA
121349188 5274 Embryophyte View MSA
123426870 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 189.895 0.0 479.502 High High
cufflinks 58.0262 0.0 131.215 High  
cufflinks 138.802 0.0 338.011 High  
cufflinks 63.2629 0.0 143.859 High  
cufflinks 79.5204 0.0 183.837 High  
cufflinks 55.7673 0.0 125.819 High  

0 Strain