Gene : Eucgr.C00848 E. grandis v2.0
Defline:  (1 of 1) PTHR10052//PTHR10052:SF11 - 60S RIBOSOMAL PROTEIN L18A Genomic Order:  699
Name:  ? Eucgr.C00848 Secondary Identifier:  ? PAC:32036392
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.C00848 0.5kb upstream 0.5kb upstream 5014 true Chr03: 13921211-13926224 Eucalyptus grandis
Eucgr.C00848 0.5kb upstream 0.5kb upstream 500 false Chr03: 13925725-13926224 Eucalyptus grandis
Eucgr.C00848 0.5kb downstream 0.5kb downstream 5014 true Chr03: 13920711-13925724 Eucalyptus grandis
Eucgr.C00848 0.5kb downstream 0.5kb downstream 500 false Chr03: 13920711-13921210 Eucalyptus grandis
Eucgr.C00848 1.0kb upstream 1.0kb upstream 5514 true Chr03: 13921211-13926724 Eucalyptus grandis
Eucgr.C00848 1.0kb upstream 1.0kb upstream 1000 false Chr03: 13925725-13926724 Eucalyptus grandis
Eucgr.C00848 1.0kb downstream 1.0kb downstream 5514 true Chr03: 13920211-13925724 Eucalyptus grandis
Eucgr.C00848 1.0kb downstream 1.0kb downstream 1000 false Chr03: 13920211-13921210 Eucalyptus grandis
Eucgr.C00848 2.0kb upstream 2.0kb upstream 6514 true Chr03: 13921211-13927724 Eucalyptus grandis
Eucgr.C00848 2.0kb upstream 2.0kb upstream 2000 false Chr03: 13925725-13927724 Eucalyptus grandis
Eucgr.C00848 2.0kb downstream 2.0kb downstream 6514 true Chr03: 13919211-13925724 Eucalyptus grandis
Eucgr.C00848 2.0kb downstream 2.0kb downstream 2000 false Chr03: 13919211-13921210 Eucalyptus grandis
Eucgr.C00848 5.0kb upstream 5.0kb upstream 9514 true Chr03: 13921211-13930724 Eucalyptus grandis
Eucgr.C00848 5.0kb upstream 5.0kb upstream 5000 false Chr03: 13925725-13930724 Eucalyptus grandis
Eucgr.C00848 5.0kb downstream 5.0kb downstream 9514 true Chr03: 13916211-13925724 Eucalyptus grandis
Eucgr.C00848 5.0kb downstream 5.0kb downstream 5000 false Chr03: 13916211-13921210 Eucalyptus grandis
Eucgr.C00848 10.0kb upstream 10.0kb upstream 14514 true Chr03: 13921211-13935724 Eucalyptus grandis
Eucgr.C00848 10.0kb upstream 10.0kb upstream 10000 false Chr03: 13925725-13935724 Eucalyptus grandis
Eucgr.C00848 10.0kb downstream 10.0kb downstream 14514 true Chr03: 13911211-13925724 Eucalyptus grandis
Eucgr.C00848 10.0kb downstream 10.0kb downstream 10000 false Chr03: 13911211-13921210 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122027441 5273 Angiosperm View MSA
124066289 5270 Rosid View MSA
123745455 5271 Pentapetalae View MSA
122796236 5272 Eudicot View MSA
121350597 5274 Embryophyte View MSA
123425775 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.4374 0.0 33.819    
cufflinks 19.6857 0.0 47.469   High
cufflinks 10.7603 0.0 27.696    
cufflinks 20.1036 0.0 48.5372   High
cufflinks 9.09187 0.0 23.7181   Low
cufflinks 10.1216 0.0 26.3303    

0 Strain