Gene : Eucgr.C00817 E. grandis v2.0
Defline:  (1 of 1) PTHR24006:SF493 - UBIQUITIN CARBOXYL-TERMINAL HYDROLASE Genomic Order:  671
Name:  ? Eucgr.C00817 Secondary Identifier:  ? PAC:32037676
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.C00817 0.5kb upstream 0.5kb upstream 5156 true Chr03: 13657739-13662894 Eucalyptus grandis
Eucgr.C00817 0.5kb upstream 0.5kb upstream 500 false Chr03: 13662395-13662894 Eucalyptus grandis
Eucgr.C00817 0.5kb downstream 0.5kb downstream 5156 true Chr03: 13657239-13662394 Eucalyptus grandis
Eucgr.C00817 0.5kb downstream 0.5kb downstream 500 false Chr03: 13657239-13657738 Eucalyptus grandis
Eucgr.C00817 1.0kb upstream 1.0kb upstream 5656 true Chr03: 13657739-13663394 Eucalyptus grandis
Eucgr.C00817 1.0kb upstream 1.0kb upstream 1000 false Chr03: 13662395-13663394 Eucalyptus grandis
Eucgr.C00817 1.0kb downstream 1.0kb downstream 5656 true Chr03: 13656739-13662394 Eucalyptus grandis
Eucgr.C00817 1.0kb downstream 1.0kb downstream 1000 false Chr03: 13656739-13657738 Eucalyptus grandis
Eucgr.C00817 2.0kb upstream 2.0kb upstream 6656 true Chr03: 13657739-13664394 Eucalyptus grandis
Eucgr.C00817 2.0kb upstream 2.0kb upstream 2000 false Chr03: 13662395-13664394 Eucalyptus grandis
Eucgr.C00817 2.0kb downstream 2.0kb downstream 6656 true Chr03: 13655739-13662394 Eucalyptus grandis
Eucgr.C00817 2.0kb downstream 2.0kb downstream 2000 false Chr03: 13655739-13657738 Eucalyptus grandis
Eucgr.C00817 5.0kb upstream 5.0kb upstream 9656 true Chr03: 13657739-13667394 Eucalyptus grandis
Eucgr.C00817 5.0kb upstream 5.0kb upstream 5000 false Chr03: 13662395-13667394 Eucalyptus grandis
Eucgr.C00817 5.0kb downstream 5.0kb downstream 9656 true Chr03: 13652739-13662394 Eucalyptus grandis
Eucgr.C00817 5.0kb downstream 5.0kb downstream 5000 false Chr03: 13652739-13657738 Eucalyptus grandis
Eucgr.C00817 10.0kb upstream 10.0kb upstream 14656 true Chr03: 13657739-13672394 Eucalyptus grandis
Eucgr.C00817 10.0kb upstream 10.0kb upstream 10000 false Chr03: 13662395-13672394 Eucalyptus grandis
Eucgr.C00817 10.0kb downstream 10.0kb downstream 14656 true Chr03: 13647739-13662394 Eucalyptus grandis
Eucgr.C00817 10.0kb downstream 10.0kb downstream 10000 false Chr03: 13647739-13657738 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124062278 5270 Rosid View MSA
123750100 5271 Pentapetalae View MSA
122785636 5272 Eudicot View MSA
122044065 5273 Angiosperm View MSA
123428966 5275 Viridiplantae View MSA
121345111 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 18.1277 0.0 40.8727   High
cufflinks 14.1654 0.0 38.4097    
cufflinks 12.7363 0.0 32.4176    
cufflinks 13.1672 0.0 33.9023    
cufflinks 11.9245 0.0 31.027    
cufflinks 11.0592 0.0 24.8416   Low

0 Strain