Gene : Eucgr.C00778 E. grandis v2.0
Defline:  (1 of 2) 2.3.1.179 - Beta-ketoacyl-[acyl-carrier-protein] synthase II / KASII Genomic Order:  635
Name:  ? Eucgr.C00778 Secondary Identifier:  ? PAC:32039238
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Sequence Feature Displayer

Ontology Annotation Displayer

8 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis FASYN-ELONG-PWY Eucalyptus grandis pathologic  
Egrandis PWY-5156 Eucalyptus grandis pathologic  
Egrandis PWY-5971 Eucalyptus grandis pathologic  
Egrandis PWY-5973 Eucalyptus grandis pathologic  
Egrandis PWY-5989 Eucalyptus grandis pathologic  
Egrandis PWY-6282 Eucalyptus grandis pathologic  
Egrandis PWY-7388 Eucalyptus grandis pathologic  
Egrandis PWY-7663 Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.C00778 0.5kb upstream 0.5kb upstream 7096 true Chr03: 13114094-13121189 Eucalyptus grandis
Eucgr.C00778 0.5kb upstream 0.5kb upstream 500 false Chr03: 13120690-13121189 Eucalyptus grandis
Eucgr.C00778 0.5kb downstream 0.5kb downstream 7096 true Chr03: 13113594-13120689 Eucalyptus grandis
Eucgr.C00778 0.5kb downstream 0.5kb downstream 500 false Chr03: 13113594-13114093 Eucalyptus grandis
Eucgr.C00778 1.0kb upstream 1.0kb upstream 7596 true Chr03: 13114094-13121689 Eucalyptus grandis
Eucgr.C00778 1.0kb upstream 1.0kb upstream 1000 false Chr03: 13120690-13121689 Eucalyptus grandis
Eucgr.C00778 1.0kb downstream 1.0kb downstream 7596 true Chr03: 13113094-13120689 Eucalyptus grandis
Eucgr.C00778 1.0kb downstream 1.0kb downstream 1000 false Chr03: 13113094-13114093 Eucalyptus grandis
Eucgr.C00778 2.0kb upstream 2.0kb upstream 8596 true Chr03: 13114094-13122689 Eucalyptus grandis
Eucgr.C00778 2.0kb upstream 2.0kb upstream 2000 false Chr03: 13120690-13122689 Eucalyptus grandis
Eucgr.C00778 2.0kb downstream 2.0kb downstream 8596 true Chr03: 13112094-13120689 Eucalyptus grandis
Eucgr.C00778 2.0kb downstream 2.0kb downstream 2000 false Chr03: 13112094-13114093 Eucalyptus grandis
Eucgr.C00778 5.0kb upstream 5.0kb upstream 11596 true Chr03: 13114094-13125689 Eucalyptus grandis
Eucgr.C00778 5.0kb upstream 5.0kb upstream 5000 false Chr03: 13120690-13125689 Eucalyptus grandis
Eucgr.C00778 5.0kb downstream 5.0kb downstream 11596 true Chr03: 13109094-13120689 Eucalyptus grandis
Eucgr.C00778 5.0kb downstream 5.0kb downstream 5000 false Chr03: 13109094-13114093 Eucalyptus grandis
Eucgr.C00778 10.0kb upstream 10.0kb upstream 16596 true Chr03: 13114094-13130689 Eucalyptus grandis
Eucgr.C00778 10.0kb upstream 10.0kb upstream 10000 false Chr03: 13120690-13130689 Eucalyptus grandis
Eucgr.C00778 10.0kb downstream 10.0kb downstream 16596 true Chr03: 13104094-13120689 Eucalyptus grandis
Eucgr.C00778 10.0kb downstream 10.0kb downstream 10000 false Chr03: 13104094-13114093 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124071420 5270 Rosid View MSA
123738483 5271 Pentapetalae View MSA
122792751 5272 Eudicot View MSA
122051170 5273 Angiosperm View MSA
121345587 5274 Embryophyte View MSA
123424058 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 18.1346 0.0 40.2536    
cufflinks 2.51752 0.0 6.46845   Low
cufflinks 25.7095 0.0 56.8558 High High
cufflinks 3.17464 0.0 7.95946    
cufflinks 5.50821 0.0 13.1149    
cufflinks 14.6786 0.0 32.8272    

0 Strain