Gene : Eucgr.C00765 E. grandis v2.0
Defline:  (1 of 1) PTHR12765 - RED PROTEIN IK FACTOR CYTOKINE IK Genomic Order:  623
Name:  ? Eucgr.C00765 Secondary Identifier:  ? PAC:32038090
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.C00765 0.5kb upstream 0.5kb upstream 5175 true Chr03: 12971273-12976447 Eucalyptus grandis
Eucgr.C00765 0.5kb upstream 0.5kb upstream 500 false Chr03: 12975948-12976447 Eucalyptus grandis
Eucgr.C00765 0.5kb downstream 0.5kb downstream 5175 true Chr03: 12970773-12975947 Eucalyptus grandis
Eucgr.C00765 0.5kb downstream 0.5kb downstream 500 false Chr03: 12970773-12971272 Eucalyptus grandis
Eucgr.C00765 1.0kb upstream 1.0kb upstream 5675 true Chr03: 12971273-12976947 Eucalyptus grandis
Eucgr.C00765 1.0kb upstream 1.0kb upstream 1000 false Chr03: 12975948-12976947 Eucalyptus grandis
Eucgr.C00765 1.0kb downstream 1.0kb downstream 5675 true Chr03: 12970273-12975947 Eucalyptus grandis
Eucgr.C00765 1.0kb downstream 1.0kb downstream 1000 false Chr03: 12970273-12971272 Eucalyptus grandis
Eucgr.C00765 2.0kb upstream 2.0kb upstream 6675 true Chr03: 12971273-12977947 Eucalyptus grandis
Eucgr.C00765 2.0kb upstream 2.0kb upstream 2000 false Chr03: 12975948-12977947 Eucalyptus grandis
Eucgr.C00765 2.0kb downstream 2.0kb downstream 6675 true Chr03: 12969273-12975947 Eucalyptus grandis
Eucgr.C00765 2.0kb downstream 2.0kb downstream 2000 false Chr03: 12969273-12971272 Eucalyptus grandis
Eucgr.C00765 5.0kb upstream 5.0kb upstream 9675 true Chr03: 12971273-12980947 Eucalyptus grandis
Eucgr.C00765 5.0kb upstream 5.0kb upstream 5000 false Chr03: 12975948-12980947 Eucalyptus grandis
Eucgr.C00765 5.0kb downstream 5.0kb downstream 9675 true Chr03: 12966273-12975947 Eucalyptus grandis
Eucgr.C00765 5.0kb downstream 5.0kb downstream 5000 false Chr03: 12966273-12971272 Eucalyptus grandis
Eucgr.C00765 10.0kb upstream 10.0kb upstream 14675 true Chr03: 12971273-12985947 Eucalyptus grandis
Eucgr.C00765 10.0kb upstream 10.0kb upstream 10000 false Chr03: 12975948-12985947 Eucalyptus grandis
Eucgr.C00765 10.0kb downstream 10.0kb downstream 14675 true Chr03: 12961273-12975947 Eucalyptus grandis
Eucgr.C00765 10.0kb downstream 10.0kb downstream 10000 false Chr03: 12961273-12971272 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124066224 5270 Rosid View MSA
123736441 5271 Pentapetalae View MSA
122793140 5272 Eudicot View MSA
122047980 5273 Angiosperm View MSA
121351353 5274 Embryophyte View MSA
123426127 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 27.1315 0.0 60.2812   High
cufflinks 16.0061 0.0 35.4145    
cufflinks 23.5931 0.0 52.2986    
cufflinks 15.1267 0.0 33.4744   Low
cufflinks 17.6824 0.0 39.1041    
cufflinks 23.8024 0.0 52.727    

0 Strain