Protein Family : splicing factor, putative, expressed 123426127

Method ID:  5275 Method Name:  Viridiplantae
Sequence Alignment:  View MSA Member Count:  87

87 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
424142 (1 of 3) PTHR12765 - RED PROTEIN IK FACTOR CYTOKINE IK S. moellendorffii v1.0 2476   scaffold_65: 689200-691675
122486 (1 of 1) PF07807//PF07808 - RED-like protein C-terminal region (RED_C) // RED-like protein N-terminal region (RED_N) S. moellendorffii v1.0 2215   scaffold_68: 435471-437685
29739.t000124 (1 of 1) K13109 - IK cytokine (IK, RED, RER) R. communis v0.1 3773   29739: 762274-766046
Cucsa.242260 (1 of 1) PTHR12765 - RED PROTEIN IK FACTOR CYTOKINE IK C. sativus v1.0 5246   scaffold02047: 2013081-2018326
orange1.1g008338m.g (1 of 1) PTHR12765 - RED PROTEIN IK FACTOR CYTOKINE IK C. sinensis v1.1 5118   scaffold00013: 1330594-1335711
AT2G26460 (1 of 1) K13109 - IK cytokine (IK, RED, RER) A. thaliana TAIR10 SMU2 4042   Chr2: 11254932-11258973
Thhalv10001246m.g (1 of 1) PTHR12765 - RED PROTEIN IK FACTOR CYTOKINE IK E. salsugineum v1.0 3658   scaffold_21: 833113-836770
Ciclev10007866m.g (1 of 1) PTHR12765 - RED PROTEIN IK FACTOR CYTOKINE IK C. clementina v1.0 5099   scaffold_1: 24859988-24865086
Lus10039918.g (1 of 2) PTHR12765 - RED PROTEIN IK FACTOR CYTOKINE IK L. usitatissimum v1.0 3686   scaffold12: 160347-164032
Lus10027665.g (1 of 2) PTHR12765 - RED PROTEIN IK FACTOR CYTOKINE IK L. usitatissimum v1.0 3670   scaffold2: 660818-664487
Gorai.009G038200 (1 of 1) PTHR12765 - RED PROTEIN IK FACTOR CYTOKINE IK G. raimondii v2.1 3887   Chr09: 2813570-2817456
estExt_Genemark1.C_20217 (1 of 1) PTHR12765 - RED PROTEIN IK FACTOR CYTOKINE IK C. subellipsoidea C-169 v2.0 4211   scaffold_2: 1289774-1293984
fgenesh2_pg.C_Chr_08000140 (1 of 1) PTHR12765 - RED PROTEIN IK FACTOR CYTOKINE IK M. sp RCC299 v3.0 2254   Chr_08: 471138-473391
fgenesh1_pg.C_Chr_4000087 (1 of 1) PTHR12765 - RED PROTEIN IK FACTOR CYTOKINE IK O. lucimarinus v2.0 1428   Chr_4: 208430-209857
Thecc1EG037459 (1 of 1) K13109 - IK cytokine (IK, RED, RER) T. cacao v1.1 4270   scaffold_9: 3578021-3582290
Migut.J00878 (1 of 1) PTHR12765 - RED PROTEIN IK FACTOR CYTOKINE IK M. guttatus v2.0 5740   scaffold_10: 5268769-5274508
Araha.30133s0001 (1 of 1) PTHR12765 - RED PROTEIN IK FACTOR CYTOKINE IK A. halleri v1.1 3662   Scaffold30133: 2322-5983
Cagra.24531s0002 (1 of 1) PTHR12765 - RED PROTEIN IK FACTOR CYTOKINE IK C. grandiflora v1.1 4048   Scaffold24531: 3479-7526
Glyma.09G074100 (1 of 2) PTHR12765 - RED PROTEIN IK FACTOR CYTOKINE IK G. max Wm82.a2.v1 5405   Chr09: 7943646-7949050
Glyma.15G183100 (1 of 2) PTHR12765 - RED PROTEIN IK FACTOR CYTOKINE IK G. max Wm82.a2.v1 5441   Chr15: 18068633-18074073
Brara.I04391 (1 of 1) PTHR12765 - RED PROTEIN IK FACTOR CYTOKINE IK B. rapa FPsc v1.3 3674   A09: 38341841-38345514
Bostr.8111s0007 (1 of 1) PTHR12765 - RED PROTEIN IK FACTOR CYTOKINE IK B. stricta v1.2 4171   Scaffold8111: 123786-127956
Cre16.g688750 (1 of 1) K13109 - IK cytokine (IK, RED, RER) C. reinhardtii v5.6 5346   chromosome_16: 3683490-3688835
Medtr2g044200 (1 of 1) PTHR12765 - RED PROTEIN IK FACTOR CYTOKINE IK M. truncatula Mt4.0v1 9367   chr2: 19223965-19233331
SapurV1A.0121s0130 (1 of 1) K13109 - IK cytokine (IK, RED, RER) S. purpurea v1.0 4873   chr18: 5703313-5708185
evm_27.TU.AmTr_v1.0_scaffold00007.315 (1 of 1) PTHR12765 - RED PROTEIN IK FACTOR CYTOKINE IK A. trichopoda v1.0 49101   AmTr_v1.0_scaffold00007: 7390762-7439862
Traes_4DS_15DCA0AD9 (1 of 2) KOG2498 - IK cytokine down-regulator of HLA class II T. aestivum v2.2 6343   ta_iwgsc_4ds_v1_2279319: 3655-9997
Eucgr.C00765 (1 of 1) PTHR12765 - RED PROTEIN IK FACTOR CYTOKINE IK E. grandis v2.0 4675   Chr03: 12971273-12975947
Prupe.7G191600 (1 of 1) PTHR12765 - RED PROTEIN IK FACTOR CYTOKINE IK P. persica v2.1 4127   Pp07: 18307706-18311832
GSMUA_AchrUn_randomG01110_001 (1 of 1) PTHR12765 - RED PROTEIN IK FACTOR CYTOKINE IK M. acuminata v1 12479   chrUn_random: 3701597-3714075

87 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
424142 S. moellendorffii v1.0 123426127 splicing factor, putative, expressed 2 5275 Viridiplantae
122486 S. moellendorffii v1.0 123426127 splicing factor, putative, expressed 2 5275 Viridiplantae
29739.m003688 R. communis v0.1 123426127 splicing factor, putative, expressed 1 5275 Viridiplantae
Cucsa.242260.1 C. sativus v1.0 123426127 splicing factor, putative, expressed 1 5275 Viridiplantae
orange1.1g008338m C. sinensis v1.1 123426127 splicing factor, putative, expressed 1 5275 Viridiplantae
AT2G26460.1 A. thaliana TAIR10 123426127 splicing factor, putative, expressed 1 5275 Viridiplantae
Thhalv10001246m E. salsugineum v1.0 123426127 splicing factor, putative, expressed 1 5275 Viridiplantae
Ciclev10007866m C. clementina v1.0 123426127 splicing factor, putative, expressed 1 5275 Viridiplantae
Lus10039918 L. usitatissimum v1.0 123426127 splicing factor, putative, expressed 2 5275 Viridiplantae
Lus10027665 L. usitatissimum v1.0 123426127 splicing factor, putative, expressed 2 5275 Viridiplantae
Gorai.009G038200.1 G. raimondii v2.1 123426127 splicing factor, putative, expressed 1 5275 Viridiplantae
64504 C. subellipsoidea C-169 v2.0 123426127 splicing factor, putative, expressed 1 5275 Viridiplantae
101849 M. sp RCC299 v3.0 123426127 splicing factor, putative, expressed 1 5275 Viridiplantae
14935 O. lucimarinus v2.0 123426127 splicing factor, putative, expressed 1 5275 Viridiplantae
Thecc1EG037459t1 T. cacao v1.1 123426127 splicing factor, putative, expressed 1 5275 Viridiplantae
Migut.J00878.1.p M. guttatus v2.0 123426127 splicing factor, putative, expressed 1 5275 Viridiplantae
Araha.30133s0001.1.p A. halleri v1.1 123426127 splicing factor, putative, expressed 1 5275 Viridiplantae
Cagra.24531s0002.1.p C. grandiflora v1.1 123426127 splicing factor, putative, expressed 1 5275 Viridiplantae
Glyma.09G074100.1.p G. max Wm82.a2.v1 123426127 splicing factor, putative, expressed 2 5275 Viridiplantae
Glyma.15G183100.1.p G. max Wm82.a2.v1 123426127 splicing factor, putative, expressed 2 5275 Viridiplantae
Brara.I04391.1.p B. rapa FPsc v1.3 123426127 splicing factor, putative, expressed 1 5275 Viridiplantae
Bostr.8111s0007.1.p B. stricta v1.2 123426127 splicing factor, putative, expressed 1 5275 Viridiplantae
Cre16.g688750.t1.2 C. reinhardtii v5.6 123426127 splicing factor, putative, expressed 1 5275 Viridiplantae
Medtr2g044200.1 M. truncatula Mt4.0v1 123426127 splicing factor, putative, expressed 1 5275 Viridiplantae
SapurV1A.0121s0130.1.p S. purpurea v1.0 123426127 splicing factor, putative, expressed 1 5275 Viridiplantae
evm_27.model.AmTr_v1.0_scaffold00007.315 A. trichopoda v1.0 123426127 splicing factor, putative, expressed 1 5275 Viridiplantae
Traes_4DS_15DCA0AD9.1 T. aestivum v2.2 123426127 splicing factor, putative, expressed 1 5275 Viridiplantae
Eucgr.C00765.1.p E. grandis v2.0 123426127 splicing factor, putative, expressed 1 5275 Viridiplantae
Prupe.7G191600.1.p P. persica v2.1 123426127 splicing factor, putative, expressed 1 5275 Viridiplantae
GSMUA_AchrUn_randomP01110_001 M. acuminata v1 123426127 splicing factor, putative, expressed 1 5275 Viridiplantae