Gene : SMU2 A. thaliana TAIR10
Primary Identifier:  ? AT2G26460 Defline:  (1 of 1) K13109 - IK cytokine (IK, RED, RER)
Genomic Order:  1923 Name:  ? AT2G26460
Secondary Identifier:  ? PAC:19641868
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G26460 0.5kb upstream 0.5kb upstream 4542 true Chr2: 11254932-11259473 Arabidopsis thaliana
AT2G26460 0.5kb upstream 0.5kb upstream 500 false Chr2: 11258974-11259473 Arabidopsis thaliana
AT2G26460 0.5kb downstream 0.5kb downstream 4542 true Chr2: 11254432-11258973 Arabidopsis thaliana
AT2G26460 0.5kb downstream 0.5kb downstream 500 false Chr2: 11254432-11254931 Arabidopsis thaliana
AT2G26460 1.0kb upstream 1.0kb upstream 5042 true Chr2: 11254932-11259973 Arabidopsis thaliana
AT2G26460 1.0kb upstream 1.0kb upstream 1000 false Chr2: 11258974-11259973 Arabidopsis thaliana
AT2G26460 1.0kb downstream 1.0kb downstream 5042 true Chr2: 11253932-11258973 Arabidopsis thaliana
AT2G26460 1.0kb downstream 1.0kb downstream 1000 false Chr2: 11253932-11254931 Arabidopsis thaliana
AT2G26460 2.0kb upstream 2.0kb upstream 6042 true Chr2: 11254932-11260973 Arabidopsis thaliana
AT2G26460 2.0kb upstream 2.0kb upstream 2000 false Chr2: 11258974-11260973 Arabidopsis thaliana
AT2G26460 2.0kb downstream 2.0kb downstream 6042 true Chr2: 11252932-11258973 Arabidopsis thaliana
AT2G26460 2.0kb downstream 2.0kb downstream 2000 false Chr2: 11252932-11254931 Arabidopsis thaliana
AT2G26460 5.0kb upstream 5.0kb upstream 9042 true Chr2: 11254932-11263973 Arabidopsis thaliana
AT2G26460 5.0kb upstream 5.0kb upstream 5000 false Chr2: 11258974-11263973 Arabidopsis thaliana
AT2G26460 5.0kb downstream 5.0kb downstream 9042 true Chr2: 11249932-11258973 Arabidopsis thaliana
AT2G26460 5.0kb downstream 5.0kb downstream 5000 false Chr2: 11249932-11254931 Arabidopsis thaliana
AT2G26460 10.0kb upstream 10.0kb upstream 14042 true Chr2: 11254932-11268973 Arabidopsis thaliana
AT2G26460 10.0kb upstream 10.0kb upstream 10000 false Chr2: 11258974-11268973 Arabidopsis thaliana
AT2G26460 10.0kb downstream 10.0kb downstream 14042 true Chr2: 11244932-11258973 Arabidopsis thaliana
AT2G26460 10.0kb downstream 10.0kb downstream 10000 false Chr2: 11244932-11254931 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362971 5261 Brassicaceae View MSA
123828376 5264 Brassicales-Malvales View MSA
124345608 5266 SBM View MSA
124240816 5268 Malvidae View MSA
124066224 5270 Rosid View MSA
123736441 5271 Pentapetalae View MSA
122793140 5272 Eudicot View MSA
122047980 5273 Angiosperm View MSA
121351353 5274 Embryophyte View MSA
123426127 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.85        
cufflinks 5.675        
cufflinks 4.276       Low
cufflinks 5.961       High
cufflinks 4.379       Low
cufflinks 5.524        

0 Strain