Gene : Medtr2g044200 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR12765 - RED PROTEIN IK FACTOR CYTOKINE IK Description:  Red-like protein amine-terminal region protein
Genomic Order:  2637 Name:  ? Medtr2g044200
Secondary Identifier:  ? PAC:31068987
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr2g044200 0.5kb upstream 0.5kb upstream 9867 true chr2: 19223465-19233331 Medicago truncatula
Medtr2g044200 0.5kb upstream 0.5kb upstream 500 false chr2: 19223465-19223964 Medicago truncatula
Medtr2g044200 0.5kb downstream 0.5kb downstream 9867 true chr2: 19223965-19233831 Medicago truncatula
Medtr2g044200 0.5kb downstream 0.5kb downstream 500 false chr2: 19233332-19233831 Medicago truncatula
Medtr2g044200 1.0kb upstream 1.0kb upstream 10367 true chr2: 19222965-19233331 Medicago truncatula
Medtr2g044200 1.0kb upstream 1.0kb upstream 1000 false chr2: 19222965-19223964 Medicago truncatula
Medtr2g044200 1.0kb downstream 1.0kb downstream 10367 true chr2: 19223965-19234331 Medicago truncatula
Medtr2g044200 1.0kb downstream 1.0kb downstream 1000 false chr2: 19233332-19234331 Medicago truncatula
Medtr2g044200 2.0kb upstream 2.0kb upstream 11367 true chr2: 19221965-19233331 Medicago truncatula
Medtr2g044200 2.0kb upstream 2.0kb upstream 2000 false chr2: 19221965-19223964 Medicago truncatula
Medtr2g044200 2.0kb downstream 2.0kb downstream 11367 true chr2: 19223965-19235331 Medicago truncatula
Medtr2g044200 2.0kb downstream 2.0kb downstream 2000 false chr2: 19233332-19235331 Medicago truncatula
Medtr2g044200 5.0kb upstream 5.0kb upstream 14367 true chr2: 19218965-19233331 Medicago truncatula
Medtr2g044200 5.0kb upstream 5.0kb upstream 5000 false chr2: 19218965-19223964 Medicago truncatula
Medtr2g044200 5.0kb downstream 5.0kb downstream 14367 true chr2: 19223965-19238331 Medicago truncatula
Medtr2g044200 5.0kb downstream 5.0kb downstream 5000 false chr2: 19233332-19238331 Medicago truncatula
Medtr2g044200 10.0kb upstream 10.0kb upstream 19367 true chr2: 19213965-19233331 Medicago truncatula
Medtr2g044200 10.0kb upstream 10.0kb upstream 10000 false chr2: 19213965-19223964 Medicago truncatula
Medtr2g044200 10.0kb downstream 10.0kb downstream 19367 true chr2: 19223965-19243331 Medicago truncatula
Medtr2g044200 10.0kb downstream 10.0kb downstream 10000 false chr2: 19233332-19243331 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305592 5265 Fabidae View MSA
124066224 5270 Rosid View MSA
123736441 5271 Pentapetalae View MSA
122793140 5272 Eudicot View MSA
122047980 5273 Angiosperm View MSA
121351353 5274 Embryophyte View MSA
123426127 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.057       High
cufflinks 3.656        
cufflinks 4.586        
cufflinks 1.906       Low
cufflinks 4.086        
cufflinks 1.598       Low
cufflinks 3.894        
cufflinks 4.28        
cufflinks 3.074        

0 Strain