Gene : Eucgr.C00662 E. grandis v2.0
Defline:  (1 of 1) PTHR24089:SF342 - PROTEIN R07E3.4 Genomic Order:  536
Name:  ? Eucgr.C00662 Secondary Identifier:  ? PAC:32038471
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.C00662 0.5kb upstream 0.5kb upstream 3279 true Chr03: 11964676-11967954 Eucalyptus grandis
Eucgr.C00662 0.5kb upstream 0.5kb upstream 500 false Chr03: 11964676-11965175 Eucalyptus grandis
Eucgr.C00662 0.5kb downstream 0.5kb downstream 3279 true Chr03: 11965176-11968454 Eucalyptus grandis
Eucgr.C00662 0.5kb downstream 0.5kb downstream 500 false Chr03: 11967955-11968454 Eucalyptus grandis
Eucgr.C00662 1.0kb upstream 1.0kb upstream 3779 true Chr03: 11964176-11967954 Eucalyptus grandis
Eucgr.C00662 1.0kb upstream 1.0kb upstream 1000 false Chr03: 11964176-11965175 Eucalyptus grandis
Eucgr.C00662 1.0kb downstream 1.0kb downstream 3779 true Chr03: 11965176-11968954 Eucalyptus grandis
Eucgr.C00662 1.0kb downstream 1.0kb downstream 1000 false Chr03: 11967955-11968954 Eucalyptus grandis
Eucgr.C00662 2.0kb upstream 2.0kb upstream 4779 true Chr03: 11963176-11967954 Eucalyptus grandis
Eucgr.C00662 2.0kb upstream 2.0kb upstream 2000 false Chr03: 11963176-11965175 Eucalyptus grandis
Eucgr.C00662 2.0kb downstream 2.0kb downstream 4779 true Chr03: 11965176-11969954 Eucalyptus grandis
Eucgr.C00662 2.0kb downstream 2.0kb downstream 2000 false Chr03: 11967955-11969954 Eucalyptus grandis
Eucgr.C00662 5.0kb upstream 5.0kb upstream 7779 true Chr03: 11960176-11967954 Eucalyptus grandis
Eucgr.C00662 5.0kb upstream 5.0kb upstream 5000 false Chr03: 11960176-11965175 Eucalyptus grandis
Eucgr.C00662 5.0kb downstream 5.0kb downstream 7779 true Chr03: 11965176-11972954 Eucalyptus grandis
Eucgr.C00662 5.0kb downstream 5.0kb downstream 5000 false Chr03: 11967955-11972954 Eucalyptus grandis
Eucgr.C00662 10.0kb upstream 10.0kb upstream 12779 true Chr03: 11955176-11967954 Eucalyptus grandis
Eucgr.C00662 10.0kb upstream 10.0kb upstream 10000 false Chr03: 11955176-11965175 Eucalyptus grandis
Eucgr.C00662 10.0kb downstream 10.0kb downstream 12779 true Chr03: 11965176-11977954 Eucalyptus grandis
Eucgr.C00662 10.0kb downstream 10.0kb downstream 10000 false Chr03: 11967955-11977954 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124065765 5270 Rosid View MSA
123737630 5271 Pentapetalae View MSA
122792945 5272 Eudicot View MSA
122042720 5273 Angiosperm View MSA
121346256 5274 Embryophyte View MSA
123427851 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.90332 0.0 7.60832    
cufflinks 0.915486 0.0 2.70916   Low
cufflinks 4.40404 0.0 11.1055    
cufflinks 4.82297 0.0 12.0196    
cufflinks 3.3955 0.0 8.77584    
cufflinks 1.7327 0.0 4.76092    

0 Strain