Gene : Eucgr.C00665 E. grandis v2.0
Defline:  (1 of 2) 5.3.99.5 - Thromboxane-A synthase / Thromboxane synthetase Genomic Order:  539
Name:  ? Eucgr.C00665 Secondary Identifier:  ? PAC:32039247
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.C00665 0.5kb upstream 0.5kb upstream 2998 true Chr03: 12001654-12004651 Eucalyptus grandis
Eucgr.C00665 0.5kb upstream 0.5kb upstream 500 false Chr03: 12001654-12002153 Eucalyptus grandis
Eucgr.C00665 0.5kb downstream 0.5kb downstream 2998 true Chr03: 12002154-12005151 Eucalyptus grandis
Eucgr.C00665 0.5kb downstream 0.5kb downstream 500 false Chr03: 12004652-12005151 Eucalyptus grandis
Eucgr.C00665 1.0kb upstream 1.0kb upstream 3498 true Chr03: 12001154-12004651 Eucalyptus grandis
Eucgr.C00665 1.0kb upstream 1.0kb upstream 1000 false Chr03: 12001154-12002153 Eucalyptus grandis
Eucgr.C00665 1.0kb downstream 1.0kb downstream 3498 true Chr03: 12002154-12005651 Eucalyptus grandis
Eucgr.C00665 1.0kb downstream 1.0kb downstream 1000 false Chr03: 12004652-12005651 Eucalyptus grandis
Eucgr.C00665 2.0kb upstream 2.0kb upstream 4498 true Chr03: 12000154-12004651 Eucalyptus grandis
Eucgr.C00665 2.0kb upstream 2.0kb upstream 2000 false Chr03: 12000154-12002153 Eucalyptus grandis
Eucgr.C00665 2.0kb downstream 2.0kb downstream 4498 true Chr03: 12002154-12006651 Eucalyptus grandis
Eucgr.C00665 2.0kb downstream 2.0kb downstream 2000 false Chr03: 12004652-12006651 Eucalyptus grandis
Eucgr.C00665 5.0kb upstream 5.0kb upstream 7498 true Chr03: 11997154-12004651 Eucalyptus grandis
Eucgr.C00665 5.0kb upstream 5.0kb upstream 5000 false Chr03: 11997154-12002153 Eucalyptus grandis
Eucgr.C00665 5.0kb downstream 5.0kb downstream 7498 true Chr03: 12002154-12009651 Eucalyptus grandis
Eucgr.C00665 5.0kb downstream 5.0kb downstream 5000 false Chr03: 12004652-12009651 Eucalyptus grandis
Eucgr.C00665 10.0kb upstream 10.0kb upstream 12498 true Chr03: 11992154-12004651 Eucalyptus grandis
Eucgr.C00665 10.0kb upstream 10.0kb upstream 10000 false Chr03: 11992154-12002153 Eucalyptus grandis
Eucgr.C00665 10.0kb downstream 10.0kb downstream 12498 true Chr03: 12002154-12014651 Eucalyptus grandis
Eucgr.C00665 10.0kb downstream 10.0kb downstream 10000 false Chr03: 12004652-12014651 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124063797 5270 Rosid View MSA
123749479 5271 Pentapetalae View MSA
122792972 5272 Eudicot View MSA
122047544 5273 Angiosperm View MSA
123429088 5275 Viridiplantae View MSA
121347167 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.52471 0.0 6.95626    
cufflinks 10.8579 0.0 25.8716    
cufflinks 3.14791 0.0 8.49879    
cufflinks 0.201597 0.0 0.759562 Low Low
cufflinks 7.88032 0.0 19.3743    
cufflinks 5.223 0.0 13.409    

0 Strain