Gene : Eucgr.C00633 E. grandis v2.0
Defline:  (1 of 1) PTHR10516:SF268 - PEPTIDYL-PROLYL CIS-TRANS ISOMERASE PASTICCINO1 Genomic Order:  510
Name:  ? Eucgr.C00633 Secondary Identifier:  ? PAC:32039805
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.C00633 0.5kb upstream 0.5kb upstream 12499 true Chr03: 11749816-11762314 Eucalyptus grandis
Eucgr.C00633 0.5kb upstream 0.5kb upstream 500 false Chr03: 11761815-11762314 Eucalyptus grandis
Eucgr.C00633 0.5kb downstream 0.5kb downstream 12499 true Chr03: 11749316-11761814 Eucalyptus grandis
Eucgr.C00633 0.5kb downstream 0.5kb downstream 500 false Chr03: 11749316-11749815 Eucalyptus grandis
Eucgr.C00633 1.0kb upstream 1.0kb upstream 12999 true Chr03: 11749816-11762814 Eucalyptus grandis
Eucgr.C00633 1.0kb upstream 1.0kb upstream 1000 false Chr03: 11761815-11762814 Eucalyptus grandis
Eucgr.C00633 1.0kb downstream 1.0kb downstream 12999 true Chr03: 11748816-11761814 Eucalyptus grandis
Eucgr.C00633 1.0kb downstream 1.0kb downstream 1000 false Chr03: 11748816-11749815 Eucalyptus grandis
Eucgr.C00633 2.0kb upstream 2.0kb upstream 13999 true Chr03: 11749816-11763814 Eucalyptus grandis
Eucgr.C00633 2.0kb upstream 2.0kb upstream 2000 false Chr03: 11761815-11763814 Eucalyptus grandis
Eucgr.C00633 2.0kb downstream 2.0kb downstream 13999 true Chr03: 11747816-11761814 Eucalyptus grandis
Eucgr.C00633 2.0kb downstream 2.0kb downstream 2000 false Chr03: 11747816-11749815 Eucalyptus grandis
Eucgr.C00633 5.0kb upstream 5.0kb upstream 16999 true Chr03: 11749816-11766814 Eucalyptus grandis
Eucgr.C00633 5.0kb upstream 5.0kb upstream 5000 false Chr03: 11761815-11766814 Eucalyptus grandis
Eucgr.C00633 5.0kb downstream 5.0kb downstream 16999 true Chr03: 11744816-11761814 Eucalyptus grandis
Eucgr.C00633 5.0kb downstream 5.0kb downstream 5000 false Chr03: 11744816-11749815 Eucalyptus grandis
Eucgr.C00633 10.0kb upstream 10.0kb upstream 21999 true Chr03: 11749816-11771814 Eucalyptus grandis
Eucgr.C00633 10.0kb upstream 10.0kb upstream 10000 false Chr03: 11761815-11771814 Eucalyptus grandis
Eucgr.C00633 10.0kb downstream 10.0kb downstream 21999 true Chr03: 11739816-11761814 Eucalyptus grandis
Eucgr.C00633 10.0kb downstream 10.0kb downstream 10000 false Chr03: 11739816-11749815 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124061046 5270 Rosid View MSA
123741397 5271 Pentapetalae View MSA
122792989 5272 Eudicot View MSA
122041915 5273 Angiosperm View MSA
121346304 5274 Embryophyte View MSA
123424056 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 15.9371 0.0 35.2592    
cufflinks 16.2885 0.0 36.0265    
cufflinks 16.0381 0.0 35.4746    
cufflinks 14.3079 0.0 31.6698    
cufflinks 9.29429 0.0 20.8237   Low
cufflinks 10.7245 0.0 23.9259    

0 Strain