Gene : Eucgr.C00622 E. grandis v2.0
Defline:  (1 of 1) PTHR13373:SF22 - GLUTAMYL-TRNA(GLN) AMIDOTRANSFERASE SUBUNIT C, CHLOROPLASTIC/MITOCHONDRIAL Genomic Order:  500
Name:  ? Eucgr.C00622 Secondary Identifier:  ? PAC:32037137
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.C00622 0.5kb upstream 0.5kb upstream 2418 true Chr03: 11620533-11622950 Eucalyptus grandis
Eucgr.C00622 0.5kb upstream 0.5kb upstream 500 false Chr03: 11622451-11622950 Eucalyptus grandis
Eucgr.C00622 0.5kb downstream 0.5kb downstream 2418 true Chr03: 11620033-11622450 Eucalyptus grandis
Eucgr.C00622 0.5kb downstream 0.5kb downstream 500 false Chr03: 11620033-11620532 Eucalyptus grandis
Eucgr.C00622 1.0kb upstream 1.0kb upstream 2918 true Chr03: 11620533-11623450 Eucalyptus grandis
Eucgr.C00622 1.0kb upstream 1.0kb upstream 1000 false Chr03: 11622451-11623450 Eucalyptus grandis
Eucgr.C00622 1.0kb downstream 1.0kb downstream 2918 true Chr03: 11619533-11622450 Eucalyptus grandis
Eucgr.C00622 1.0kb downstream 1.0kb downstream 1000 false Chr03: 11619533-11620532 Eucalyptus grandis
Eucgr.C00622 2.0kb upstream 2.0kb upstream 3918 true Chr03: 11620533-11624450 Eucalyptus grandis
Eucgr.C00622 2.0kb upstream 2.0kb upstream 2000 false Chr03: 11622451-11624450 Eucalyptus grandis
Eucgr.C00622 2.0kb downstream 2.0kb downstream 3918 true Chr03: 11618533-11622450 Eucalyptus grandis
Eucgr.C00622 2.0kb downstream 2.0kb downstream 2000 false Chr03: 11618533-11620532 Eucalyptus grandis
Eucgr.C00622 5.0kb upstream 5.0kb upstream 6918 true Chr03: 11620533-11627450 Eucalyptus grandis
Eucgr.C00622 5.0kb upstream 5.0kb upstream 5000 false Chr03: 11622451-11627450 Eucalyptus grandis
Eucgr.C00622 5.0kb downstream 5.0kb downstream 6918 true Chr03: 11615533-11622450 Eucalyptus grandis
Eucgr.C00622 5.0kb downstream 5.0kb downstream 5000 false Chr03: 11615533-11620532 Eucalyptus grandis
Eucgr.C00622 10.0kb upstream 10.0kb upstream 11918 true Chr03: 11620533-11632450 Eucalyptus grandis
Eucgr.C00622 10.0kb upstream 10.0kb upstream 10000 false Chr03: 11622451-11632450 Eucalyptus grandis
Eucgr.C00622 10.0kb downstream 10.0kb downstream 11918 true Chr03: 11610533-11622450 Eucalyptus grandis
Eucgr.C00622 10.0kb downstream 10.0kb downstream 10000 false Chr03: 11610533-11620532 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124065204 5270 Rosid View MSA
123741294 5271 Pentapetalae View MSA
122794718 5272 Eudicot View MSA
122044892 5273 Angiosperm View MSA
121344912 5274 Embryophyte View MSA
123380128 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.91296 0.0 19.8486    
cufflinks 3.04868 0.0 8.38361    
cufflinks 5.09838 0.0 13.3532    
cufflinks 1.63344 0.0 4.79253   Low
cufflinks 4.72416 0.0 12.4495    
cufflinks 8.85759 0.0 22.0147   High

0 Strain