Gene : Eucgr.C01454 E. grandis v2.0
Defline:  (1 of 5) PTHR10992//PTHR10992:SF841 - ALPHA/BETA HYDROLASE FOLD-CONTAINING PROTEIN Genomic Order:  1111
Name:  ? Eucgr.C01454 Secondary Identifier:  ? PAC:32036844
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.C01454 0.5kb upstream 0.5kb upstream 4442 true Chr03: 22316543-22320984 Eucalyptus grandis
Eucgr.C01454 0.5kb upstream 0.5kb upstream 500 false Chr03: 22316543-22317042 Eucalyptus grandis
Eucgr.C01454 0.5kb downstream 0.5kb downstream 4442 true Chr03: 22317043-22321484 Eucalyptus grandis
Eucgr.C01454 0.5kb downstream 0.5kb downstream 500 false Chr03: 22320985-22321484 Eucalyptus grandis
Eucgr.C01454 1.0kb upstream 1.0kb upstream 4942 true Chr03: 22316043-22320984 Eucalyptus grandis
Eucgr.C01454 1.0kb upstream 1.0kb upstream 1000 false Chr03: 22316043-22317042 Eucalyptus grandis
Eucgr.C01454 1.0kb downstream 1.0kb downstream 4942 true Chr03: 22317043-22321984 Eucalyptus grandis
Eucgr.C01454 1.0kb downstream 1.0kb downstream 1000 false Chr03: 22320985-22321984 Eucalyptus grandis
Eucgr.C01454 2.0kb upstream 2.0kb upstream 5942 true Chr03: 22315043-22320984 Eucalyptus grandis
Eucgr.C01454 2.0kb upstream 2.0kb upstream 2000 false Chr03: 22315043-22317042 Eucalyptus grandis
Eucgr.C01454 2.0kb downstream 2.0kb downstream 5942 true Chr03: 22317043-22322984 Eucalyptus grandis
Eucgr.C01454 2.0kb downstream 2.0kb downstream 2000 false Chr03: 22320985-22322984 Eucalyptus grandis
Eucgr.C01454 5.0kb upstream 5.0kb upstream 8942 true Chr03: 22312043-22320984 Eucalyptus grandis
Eucgr.C01454 5.0kb upstream 5.0kb upstream 5000 false Chr03: 22312043-22317042 Eucalyptus grandis
Eucgr.C01454 5.0kb downstream 5.0kb downstream 8942 true Chr03: 22317043-22325984 Eucalyptus grandis
Eucgr.C01454 5.0kb downstream 5.0kb downstream 5000 false Chr03: 22320985-22325984 Eucalyptus grandis
Eucgr.C01454 10.0kb upstream 10.0kb upstream 13942 true Chr03: 22307043-22320984 Eucalyptus grandis
Eucgr.C01454 10.0kb upstream 10.0kb upstream 10000 false Chr03: 22307043-22317042 Eucalyptus grandis
Eucgr.C01454 10.0kb downstream 10.0kb downstream 13942 true Chr03: 22317043-22330984 Eucalyptus grandis
Eucgr.C01454 10.0kb downstream 10.0kb downstream 10000 false Chr03: 22320985-22330984 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124066716 5270 Rosid View MSA
123750652 5271 Pentapetalae View MSA
122793074 5272 Eudicot View MSA
122048522 5273 Angiosperm View MSA
123428977 5275 Viridiplantae View MSA
121350361 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 17.0716 0.0 39.6912    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 9.89928 0.0 24.2995   Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 28.6149 0.0 64.2219    

0 Strain