Gene : Eucgr.C01173 E. grandis v2.0
Defline:  (1 of 6) PTHR34203:SF2 - EXPRESSED PROTEIN Genomic Order:  989
Name:  ? Eucgr.C01173 Secondary Identifier:  ? PAC:32037163
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.C01173 0.5kb upstream 0.5kb upstream 3161 true Chr03: 18622314-18625474 Eucalyptus grandis
Eucgr.C01173 0.5kb upstream 0.5kb upstream 500 false Chr03: 18622314-18622813 Eucalyptus grandis
Eucgr.C01173 0.5kb downstream 0.5kb downstream 3161 true Chr03: 18622814-18625974 Eucalyptus grandis
Eucgr.C01173 0.5kb downstream 0.5kb downstream 500 false Chr03: 18625475-18625974 Eucalyptus grandis
Eucgr.C01173 1.0kb upstream 1.0kb upstream 3661 true Chr03: 18621814-18625474 Eucalyptus grandis
Eucgr.C01173 1.0kb upstream 1.0kb upstream 1000 false Chr03: 18621814-18622813 Eucalyptus grandis
Eucgr.C01173 1.0kb downstream 1.0kb downstream 3661 true Chr03: 18622814-18626474 Eucalyptus grandis
Eucgr.C01173 1.0kb downstream 1.0kb downstream 1000 false Chr03: 18625475-18626474 Eucalyptus grandis
Eucgr.C01173 2.0kb upstream 2.0kb upstream 4661 true Chr03: 18620814-18625474 Eucalyptus grandis
Eucgr.C01173 2.0kb upstream 2.0kb upstream 2000 false Chr03: 18620814-18622813 Eucalyptus grandis
Eucgr.C01173 2.0kb downstream 2.0kb downstream 4661 true Chr03: 18622814-18627474 Eucalyptus grandis
Eucgr.C01173 2.0kb downstream 2.0kb downstream 2000 false Chr03: 18625475-18627474 Eucalyptus grandis
Eucgr.C01173 5.0kb upstream 5.0kb upstream 7661 true Chr03: 18617814-18625474 Eucalyptus grandis
Eucgr.C01173 5.0kb upstream 5.0kb upstream 5000 false Chr03: 18617814-18622813 Eucalyptus grandis
Eucgr.C01173 5.0kb downstream 5.0kb downstream 7661 true Chr03: 18622814-18630474 Eucalyptus grandis
Eucgr.C01173 5.0kb downstream 5.0kb downstream 5000 false Chr03: 18625475-18630474 Eucalyptus grandis
Eucgr.C01173 10.0kb upstream 10.0kb upstream 12661 true Chr03: 18612814-18625474 Eucalyptus grandis
Eucgr.C01173 10.0kb upstream 10.0kb upstream 10000 false Chr03: 18612814-18622813 Eucalyptus grandis
Eucgr.C01173 10.0kb downstream 10.0kb downstream 12661 true Chr03: 18622814-18635474 Eucalyptus grandis
Eucgr.C01173 10.0kb downstream 10.0kb downstream 10000 false Chr03: 18625475-18635474 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124060893 5270 Rosid View MSA
123751277 5271 Pentapetalae View MSA
122786688 5272 Eudicot View MSA
122043086 5273 Angiosperm View MSA
121350667 5274 Embryophyte View MSA
123426731 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.99249 0.0 12.523    
cufflinks 15.7603 0.0 35.6737   High
cufflinks 5.80609 0.0 14.3506    
cufflinks 11.3999 0.0 26.3893    
cufflinks 13.9155 0.0 31.7682    
cufflinks 4.43078 0.0 11.2404   Low

0 Strain