Gene : Eucgr.C01176 E. grandis v2.0
Defline:  (1 of 3) 1.14.99.3 - Heme oxygenase (biliverdin-producing) / Heme oxygenase (decyclizing) Genomic Order:  992
Name:  ? Eucgr.C01176 Secondary Identifier:  ? PAC:32038050
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis PWY-5874 Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.C01176 0.5kb upstream 0.5kb upstream 4362 true Chr03: 18633303-18637664 Eucalyptus grandis
Eucgr.C01176 0.5kb upstream 0.5kb upstream 500 false Chr03: 18637165-18637664 Eucalyptus grandis
Eucgr.C01176 0.5kb downstream 0.5kb downstream 4362 true Chr03: 18632803-18637164 Eucalyptus grandis
Eucgr.C01176 0.5kb downstream 0.5kb downstream 500 false Chr03: 18632803-18633302 Eucalyptus grandis
Eucgr.C01176 1.0kb upstream 1.0kb upstream 4862 true Chr03: 18633303-18638164 Eucalyptus grandis
Eucgr.C01176 1.0kb upstream 1.0kb upstream 1000 false Chr03: 18637165-18638164 Eucalyptus grandis
Eucgr.C01176 1.0kb downstream 1.0kb downstream 4862 true Chr03: 18632303-18637164 Eucalyptus grandis
Eucgr.C01176 1.0kb downstream 1.0kb downstream 1000 false Chr03: 18632303-18633302 Eucalyptus grandis
Eucgr.C01176 2.0kb upstream 2.0kb upstream 5862 true Chr03: 18633303-18639164 Eucalyptus grandis
Eucgr.C01176 2.0kb upstream 2.0kb upstream 2000 false Chr03: 18637165-18639164 Eucalyptus grandis
Eucgr.C01176 2.0kb downstream 2.0kb downstream 5862 true Chr03: 18631303-18637164 Eucalyptus grandis
Eucgr.C01176 2.0kb downstream 2.0kb downstream 2000 false Chr03: 18631303-18633302 Eucalyptus grandis
Eucgr.C01176 5.0kb upstream 5.0kb upstream 8862 true Chr03: 18633303-18642164 Eucalyptus grandis
Eucgr.C01176 5.0kb upstream 5.0kb upstream 5000 false Chr03: 18637165-18642164 Eucalyptus grandis
Eucgr.C01176 5.0kb downstream 5.0kb downstream 8862 true Chr03: 18628303-18637164 Eucalyptus grandis
Eucgr.C01176 5.0kb downstream 5.0kb downstream 5000 false Chr03: 18628303-18633302 Eucalyptus grandis
Eucgr.C01176 10.0kb upstream 10.0kb upstream 13862 true Chr03: 18633303-18647164 Eucalyptus grandis
Eucgr.C01176 10.0kb upstream 10.0kb upstream 10000 false Chr03: 18637165-18647164 Eucalyptus grandis
Eucgr.C01176 10.0kb downstream 10.0kb downstream 13862 true Chr03: 18623303-18637164 Eucalyptus grandis
Eucgr.C01176 10.0kb downstream 10.0kb downstream 10000 false Chr03: 18623303-18633302 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124067644 5270 Rosid View MSA
123739396 5271 Pentapetalae View MSA
122788325 5272 Eudicot View MSA
122047622 5273 Angiosperm View MSA
121347679 5274 Embryophyte View MSA
123424297 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 20.132 0.0 44.8417    
cufflinks 15.012 0.0 33.8163    
cufflinks 15.2024 0.0 34.2601    
cufflinks 11.1233 0.0 25.5137   Low
cufflinks 16.5395 0.0 37.1116    
cufflinks 32.4222 0.0 71.7   High

0 Strain