Gene : Eucgr.C01076 E. grandis v2.0
Defline:  (1 of 2) PTHR11941:SF47 - 3-HYDROXYISOBUTYRYL-COA HYDROLASE-LIKE PROTEIN 3, MITOCHONDRIAL-RELATED Genomic Order:  914
Name:  ? Eucgr.C01076 Secondary Identifier:  ? PAC:32039687
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis PWY-7574 Eucalyptus grandis pathologic  
Egrandis VALDEG-PWY Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.C01076 0.5kb upstream 0.5kb upstream 6633 true Chr03: 17419977-17426609 Eucalyptus grandis
Eucgr.C01076 0.5kb upstream 0.5kb upstream 500 false Chr03: 17419977-17420476 Eucalyptus grandis
Eucgr.C01076 0.5kb downstream 0.5kb downstream 6633 true Chr03: 17420477-17427109 Eucalyptus grandis
Eucgr.C01076 0.5kb downstream 0.5kb downstream 500 false Chr03: 17426610-17427109 Eucalyptus grandis
Eucgr.C01076 1.0kb upstream 1.0kb upstream 7133 true Chr03: 17419477-17426609 Eucalyptus grandis
Eucgr.C01076 1.0kb upstream 1.0kb upstream 1000 false Chr03: 17419477-17420476 Eucalyptus grandis
Eucgr.C01076 1.0kb downstream 1.0kb downstream 7133 true Chr03: 17420477-17427609 Eucalyptus grandis
Eucgr.C01076 1.0kb downstream 1.0kb downstream 1000 false Chr03: 17426610-17427609 Eucalyptus grandis
Eucgr.C01076 2.0kb upstream 2.0kb upstream 8133 true Chr03: 17418477-17426609 Eucalyptus grandis
Eucgr.C01076 2.0kb upstream 2.0kb upstream 2000 false Chr03: 17418477-17420476 Eucalyptus grandis
Eucgr.C01076 2.0kb downstream 2.0kb downstream 8133 true Chr03: 17420477-17428609 Eucalyptus grandis
Eucgr.C01076 2.0kb downstream 2.0kb downstream 2000 false Chr03: 17426610-17428609 Eucalyptus grandis
Eucgr.C01076 5.0kb upstream 5.0kb upstream 11133 true Chr03: 17415477-17426609 Eucalyptus grandis
Eucgr.C01076 5.0kb upstream 5.0kb upstream 5000 false Chr03: 17415477-17420476 Eucalyptus grandis
Eucgr.C01076 5.0kb downstream 5.0kb downstream 11133 true Chr03: 17420477-17431609 Eucalyptus grandis
Eucgr.C01076 5.0kb downstream 5.0kb downstream 5000 false Chr03: 17426610-17431609 Eucalyptus grandis
Eucgr.C01076 10.0kb upstream 10.0kb upstream 16133 true Chr03: 17410477-17426609 Eucalyptus grandis
Eucgr.C01076 10.0kb upstream 10.0kb upstream 10000 false Chr03: 17410477-17420476 Eucalyptus grandis
Eucgr.C01076 10.0kb downstream 10.0kb downstream 16133 true Chr03: 17420477-17436609 Eucalyptus grandis
Eucgr.C01076 10.0kb downstream 10.0kb downstream 10000 false Chr03: 17426610-17436609 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124062790 5270 Rosid View MSA
123736402 5271 Pentapetalae View MSA
122794984 5272 Eudicot View MSA
122043157 5273 Angiosperm View MSA
121344613 5274 Embryophyte View MSA
123428448 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 23.858 0.0 68.2137   Low
cufflinks 42.3628 0.0 97.4908 High High
cufflinks 26.4434 0.0 69.2105 High  
cufflinks 32.2358 0.0 94.5775    
cufflinks 42.9794 0.0 107.212 High High
cufflinks 26.7323 0.0 75.3209    

0 Strain