Gene : Eucgr.C01048 E. grandis v2.0
Defline:  (1 of 6) KOG0092 - GTPase Rab5/YPT51 and related small G protein superfamily GTPases Genomic Order:  892
Name:  ? Eucgr.C01048 Secondary Identifier:  ? PAC:32037283
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.C01048 0.5kb upstream 0.5kb upstream 5059 true Chr03: 17103688-17108746 Eucalyptus grandis
Eucgr.C01048 0.5kb upstream 0.5kb upstream 500 false Chr03: 17108247-17108746 Eucalyptus grandis
Eucgr.C01048 0.5kb downstream 0.5kb downstream 5059 true Chr03: 17103188-17108246 Eucalyptus grandis
Eucgr.C01048 0.5kb downstream 0.5kb downstream 500 false Chr03: 17103188-17103687 Eucalyptus grandis
Eucgr.C01048 1.0kb upstream 1.0kb upstream 5559 true Chr03: 17103688-17109246 Eucalyptus grandis
Eucgr.C01048 1.0kb upstream 1.0kb upstream 1000 false Chr03: 17108247-17109246 Eucalyptus grandis
Eucgr.C01048 1.0kb downstream 1.0kb downstream 5559 true Chr03: 17102688-17108246 Eucalyptus grandis
Eucgr.C01048 1.0kb downstream 1.0kb downstream 1000 false Chr03: 17102688-17103687 Eucalyptus grandis
Eucgr.C01048 2.0kb upstream 2.0kb upstream 6559 true Chr03: 17103688-17110246 Eucalyptus grandis
Eucgr.C01048 2.0kb upstream 2.0kb upstream 2000 false Chr03: 17108247-17110246 Eucalyptus grandis
Eucgr.C01048 2.0kb downstream 2.0kb downstream 6559 true Chr03: 17101688-17108246 Eucalyptus grandis
Eucgr.C01048 2.0kb downstream 2.0kb downstream 2000 false Chr03: 17101688-17103687 Eucalyptus grandis
Eucgr.C01048 5.0kb upstream 5.0kb upstream 9559 true Chr03: 17103688-17113246 Eucalyptus grandis
Eucgr.C01048 5.0kb upstream 5.0kb upstream 5000 false Chr03: 17108247-17113246 Eucalyptus grandis
Eucgr.C01048 5.0kb downstream 5.0kb downstream 9559 true Chr03: 17098688-17108246 Eucalyptus grandis
Eucgr.C01048 5.0kb downstream 5.0kb downstream 5000 false Chr03: 17098688-17103687 Eucalyptus grandis
Eucgr.C01048 10.0kb upstream 10.0kb upstream 14559 true Chr03: 17103688-17118246 Eucalyptus grandis
Eucgr.C01048 10.0kb upstream 10.0kb upstream 10000 false Chr03: 17108247-17118246 Eucalyptus grandis
Eucgr.C01048 10.0kb downstream 10.0kb downstream 14559 true Chr03: 17093688-17108246 Eucalyptus grandis
Eucgr.C01048 10.0kb downstream 10.0kb downstream 10000 false Chr03: 17093688-17103687 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124070426 5270 Rosid View MSA
123753240 5271 Pentapetalae View MSA
122795840 5272 Eudicot View MSA
122049622 5273 Angiosperm View MSA
121344376 5274 Embryophyte View MSA
123424016 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 21.9105 0.0 49.1187    
cufflinks 18.6957 0.0 42.2424    
cufflinks 19.6007 0.0 44.1272    
cufflinks 13.4847 0.0 31.0089    
cufflinks 10.1082 0.0 23.898   Low
cufflinks 38.9917 0.0 86.2572 High High

0 Strain