Gene : Eucgr.C01033 E. grandis v2.0
Defline:  (1 of 1) 6.3.4.19 - tRNA(Ile)-lysidine synthetase / Isoleucine-specific transfer ribonucleate lysidine synthetase Genomic Order:  879
Name:  ? Eucgr.C01033 Secondary Identifier:  ? PAC:32039787
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.C01033 0.5kb upstream 0.5kb upstream 5457 true Chr03: 16905900-16911356 Eucalyptus grandis
Eucgr.C01033 0.5kb upstream 0.5kb upstream 500 false Chr03: 16910857-16911356 Eucalyptus grandis
Eucgr.C01033 0.5kb downstream 0.5kb downstream 5457 true Chr03: 16905400-16910856 Eucalyptus grandis
Eucgr.C01033 0.5kb downstream 0.5kb downstream 500 false Chr03: 16905400-16905899 Eucalyptus grandis
Eucgr.C01033 1.0kb upstream 1.0kb upstream 5957 true Chr03: 16905900-16911856 Eucalyptus grandis
Eucgr.C01033 1.0kb upstream 1.0kb upstream 1000 false Chr03: 16910857-16911856 Eucalyptus grandis
Eucgr.C01033 1.0kb downstream 1.0kb downstream 5957 true Chr03: 16904900-16910856 Eucalyptus grandis
Eucgr.C01033 1.0kb downstream 1.0kb downstream 1000 false Chr03: 16904900-16905899 Eucalyptus grandis
Eucgr.C01033 2.0kb upstream 2.0kb upstream 6957 true Chr03: 16905900-16912856 Eucalyptus grandis
Eucgr.C01033 2.0kb upstream 2.0kb upstream 2000 false Chr03: 16910857-16912856 Eucalyptus grandis
Eucgr.C01033 2.0kb downstream 2.0kb downstream 6957 true Chr03: 16903900-16910856 Eucalyptus grandis
Eucgr.C01033 2.0kb downstream 2.0kb downstream 2000 false Chr03: 16903900-16905899 Eucalyptus grandis
Eucgr.C01033 5.0kb upstream 5.0kb upstream 9957 true Chr03: 16905900-16915856 Eucalyptus grandis
Eucgr.C01033 5.0kb upstream 5.0kb upstream 5000 false Chr03: 16910857-16915856 Eucalyptus grandis
Eucgr.C01033 5.0kb downstream 5.0kb downstream 9957 true Chr03: 16900900-16910856 Eucalyptus grandis
Eucgr.C01033 5.0kb downstream 5.0kb downstream 5000 false Chr03: 16900900-16905899 Eucalyptus grandis
Eucgr.C01033 10.0kb upstream 10.0kb upstream 14957 true Chr03: 16905900-16920856 Eucalyptus grandis
Eucgr.C01033 10.0kb upstream 10.0kb upstream 10000 false Chr03: 16910857-16920856 Eucalyptus grandis
Eucgr.C01033 10.0kb downstream 10.0kb downstream 14957 true Chr03: 16895900-16910856 Eucalyptus grandis
Eucgr.C01033 10.0kb downstream 10.0kb downstream 10000 false Chr03: 16895900-16905899 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026304 5273 Angiosperm View MSA
124063792 5270 Rosid View MSA
123738903 5271 Pentapetalae View MSA
122792916 5272 Eudicot View MSA
121345916 5274 Embryophyte View MSA
123380288 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.98938 0.0 7.40602    
cufflinks 0.241986 0.0 0.779064 Low Low
cufflinks 2.02011 0.0 5.18908    
cufflinks 1.05092 0.0 2.86782    
cufflinks 0.694433 0.0 1.98545 Low  
cufflinks 3.10192 0.0 7.70952    

0 Strain