Gene : Eucgr.C02133 E. grandis v2.0
Defline:  (1 of 1) PTHR11599:SF4 - PROTEASOME SUBUNIT BETA TYPE Genomic Order:  1682
Name:  ? Eucgr.C02133 Secondary Identifier:  ? PAC:32039571
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.C02133 0.5kb upstream 0.5kb upstream 5510 true Chr03: 39621833-39627342 Eucalyptus grandis
Eucgr.C02133 0.5kb upstream 0.5kb upstream 500 false Chr03: 39626843-39627342 Eucalyptus grandis
Eucgr.C02133 0.5kb downstream 0.5kb downstream 5510 true Chr03: 39621333-39626842 Eucalyptus grandis
Eucgr.C02133 0.5kb downstream 0.5kb downstream 500 false Chr03: 39621333-39621832 Eucalyptus grandis
Eucgr.C02133 1.0kb upstream 1.0kb upstream 6010 true Chr03: 39621833-39627842 Eucalyptus grandis
Eucgr.C02133 1.0kb upstream 1.0kb upstream 1000 false Chr03: 39626843-39627842 Eucalyptus grandis
Eucgr.C02133 1.0kb downstream 1.0kb downstream 6010 true Chr03: 39620833-39626842 Eucalyptus grandis
Eucgr.C02133 1.0kb downstream 1.0kb downstream 1000 false Chr03: 39620833-39621832 Eucalyptus grandis
Eucgr.C02133 2.0kb upstream 2.0kb upstream 7010 true Chr03: 39621833-39628842 Eucalyptus grandis
Eucgr.C02133 2.0kb upstream 2.0kb upstream 2000 false Chr03: 39626843-39628842 Eucalyptus grandis
Eucgr.C02133 2.0kb downstream 2.0kb downstream 7010 true Chr03: 39619833-39626842 Eucalyptus grandis
Eucgr.C02133 2.0kb downstream 2.0kb downstream 2000 false Chr03: 39619833-39621832 Eucalyptus grandis
Eucgr.C02133 5.0kb upstream 5.0kb upstream 10010 true Chr03: 39621833-39631842 Eucalyptus grandis
Eucgr.C02133 5.0kb upstream 5.0kb upstream 5000 false Chr03: 39626843-39631842 Eucalyptus grandis
Eucgr.C02133 5.0kb downstream 5.0kb downstream 10010 true Chr03: 39616833-39626842 Eucalyptus grandis
Eucgr.C02133 5.0kb downstream 5.0kb downstream 5000 false Chr03: 39616833-39621832 Eucalyptus grandis
Eucgr.C02133 10.0kb upstream 10.0kb upstream 15010 true Chr03: 39621833-39636842 Eucalyptus grandis
Eucgr.C02133 10.0kb upstream 10.0kb upstream 10000 false Chr03: 39626843-39636842 Eucalyptus grandis
Eucgr.C02133 10.0kb downstream 10.0kb downstream 15010 true Chr03: 39611833-39626842 Eucalyptus grandis
Eucgr.C02133 10.0kb downstream 10.0kb downstream 10000 false Chr03: 39611833-39621832 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124072118 5270 Rosid View MSA
123739837 5271 Pentapetalae View MSA
122787112 5272 Eudicot View MSA
122042540 5273 Angiosperm View MSA
121348107 5274 Embryophyte View MSA
123423963 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 64.9169 0.0 149.152 High  
cufflinks 78.0868 0.0 181.63 High  
cufflinks 59.9771 0.0 136.691 High  
cufflinks 91.6633 0.0 259.987 High High
cufflinks 54.9061 0.0 124.39 High  
cufflinks 56.5422 0.0 148.837 High  

0 Strain