Gene : Eucgr.C02139 E. grandis v2.0
Defline:  (1 of 1) PTHR11390:SF27 - DNA TOPOISOMERASE Genomic Order:  1688
Name:  ? Eucgr.C02139 Secondary Identifier:  ? PAC:32038943
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.C02139 0.5kb upstream 0.5kb upstream 25725 true Chr03: 39723107-39748831 Eucalyptus grandis
Eucgr.C02139 0.5kb upstream 0.5kb upstream 500 false Chr03: 39748332-39748831 Eucalyptus grandis
Eucgr.C02139 0.5kb downstream 0.5kb downstream 25725 true Chr03: 39722607-39748331 Eucalyptus grandis
Eucgr.C02139 0.5kb downstream 0.5kb downstream 500 false Chr03: 39722607-39723106 Eucalyptus grandis
Eucgr.C02139 1.0kb upstream 1.0kb upstream 26225 true Chr03: 39723107-39749331 Eucalyptus grandis
Eucgr.C02139 1.0kb upstream 1.0kb upstream 1000 false Chr03: 39748332-39749331 Eucalyptus grandis
Eucgr.C02139 1.0kb downstream 1.0kb downstream 26225 true Chr03: 39722107-39748331 Eucalyptus grandis
Eucgr.C02139 1.0kb downstream 1.0kb downstream 1000 false Chr03: 39722107-39723106 Eucalyptus grandis
Eucgr.C02139 2.0kb upstream 2.0kb upstream 27225 true Chr03: 39723107-39750331 Eucalyptus grandis
Eucgr.C02139 2.0kb upstream 2.0kb upstream 2000 false Chr03: 39748332-39750331 Eucalyptus grandis
Eucgr.C02139 2.0kb downstream 2.0kb downstream 27225 true Chr03: 39721107-39748331 Eucalyptus grandis
Eucgr.C02139 2.0kb downstream 2.0kb downstream 2000 false Chr03: 39721107-39723106 Eucalyptus grandis
Eucgr.C02139 5.0kb upstream 5.0kb upstream 30225 true Chr03: 39723107-39753331 Eucalyptus grandis
Eucgr.C02139 5.0kb upstream 5.0kb upstream 5000 false Chr03: 39748332-39753331 Eucalyptus grandis
Eucgr.C02139 5.0kb downstream 5.0kb downstream 30225 true Chr03: 39718107-39748331 Eucalyptus grandis
Eucgr.C02139 5.0kb downstream 5.0kb downstream 5000 false Chr03: 39718107-39723106 Eucalyptus grandis
Eucgr.C02139 10.0kb upstream 10.0kb upstream 35225 true Chr03: 39723107-39758331 Eucalyptus grandis
Eucgr.C02139 10.0kb upstream 10.0kb upstream 10000 false Chr03: 39748332-39758331 Eucalyptus grandis
Eucgr.C02139 10.0kb downstream 10.0kb downstream 35225 true Chr03: 39713107-39748331 Eucalyptus grandis
Eucgr.C02139 10.0kb downstream 10.0kb downstream 10000 false Chr03: 39713107-39723106 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124062763 5270 Rosid View MSA
123739329 5271 Pentapetalae View MSA
122792755 5272 Eudicot View MSA
122047422 5273 Angiosperm View MSA
121351439 5274 Embryophyte View MSA
123426817 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.39959 0.0 12.5022    
cufflinks 2.0235 0.0 4.95541   Low
cufflinks 4.55745 0.0 10.8432    
cufflinks 3.09025 0.0 7.20194    
cufflinks 5.11005 0.0 11.9353    
cufflinks 6.43311 0.0 14.8849   High

0 Strain