Gene : Eucgr.C02143 E. grandis v2.0
Defline:  (1 of 1) PTHR23342 - N-ACETYLGLUTAMATE SYNTHASE Genomic Order:  1692
Name:  ? Eucgr.C02143 Secondary Identifier:  ? PAC:32037888
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis ARGSYNBSUB-PWY Eucalyptus grandis pathologic  
Egrandis ARGSYN-PWY Eucalyptus grandis pathologic  
Egrandis GLUTORN-PWY Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.C02143 0.5kb upstream 0.5kb upstream 2351 true Chr03: 39801272-39803622 Eucalyptus grandis
Eucgr.C02143 0.5kb upstream 0.5kb upstream 500 false Chr03: 39803123-39803622 Eucalyptus grandis
Eucgr.C02143 0.5kb downstream 0.5kb downstream 2351 true Chr03: 39800772-39803122 Eucalyptus grandis
Eucgr.C02143 0.5kb downstream 0.5kb downstream 500 false Chr03: 39800772-39801271 Eucalyptus grandis
Eucgr.C02143 1.0kb upstream 1.0kb upstream 2851 true Chr03: 39801272-39804122 Eucalyptus grandis
Eucgr.C02143 1.0kb upstream 1.0kb upstream 1000 false Chr03: 39803123-39804122 Eucalyptus grandis
Eucgr.C02143 1.0kb downstream 1.0kb downstream 2851 true Chr03: 39800272-39803122 Eucalyptus grandis
Eucgr.C02143 1.0kb downstream 1.0kb downstream 1000 false Chr03: 39800272-39801271 Eucalyptus grandis
Eucgr.C02143 2.0kb upstream 2.0kb upstream 3851 true Chr03: 39801272-39805122 Eucalyptus grandis
Eucgr.C02143 2.0kb upstream 2.0kb upstream 2000 false Chr03: 39803123-39805122 Eucalyptus grandis
Eucgr.C02143 2.0kb downstream 2.0kb downstream 3851 true Chr03: 39799272-39803122 Eucalyptus grandis
Eucgr.C02143 2.0kb downstream 2.0kb downstream 2000 false Chr03: 39799272-39801271 Eucalyptus grandis
Eucgr.C02143 5.0kb upstream 5.0kb upstream 6851 true Chr03: 39801272-39808122 Eucalyptus grandis
Eucgr.C02143 5.0kb upstream 5.0kb upstream 5000 false Chr03: 39803123-39808122 Eucalyptus grandis
Eucgr.C02143 5.0kb downstream 5.0kb downstream 6851 true Chr03: 39796272-39803122 Eucalyptus grandis
Eucgr.C02143 5.0kb downstream 5.0kb downstream 5000 false Chr03: 39796272-39801271 Eucalyptus grandis
Eucgr.C02143 10.0kb upstream 10.0kb upstream 11851 true Chr03: 39801272-39813122 Eucalyptus grandis
Eucgr.C02143 10.0kb upstream 10.0kb upstream 10000 false Chr03: 39803123-39813122 Eucalyptus grandis
Eucgr.C02143 10.0kb downstream 10.0kb downstream 11851 true Chr03: 39791272-39803122 Eucalyptus grandis
Eucgr.C02143 10.0kb downstream 10.0kb downstream 10000 false Chr03: 39791272-39801271 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124062864 5270 Rosid View MSA
123739875 5271 Pentapetalae View MSA
122792416 5272 Eudicot View MSA
122045485 5273 Angiosperm View MSA
121347525 5274 Embryophyte View MSA
123424020 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 15.8048 0.0 35.79    
cufflinks 16.616 0.0 37.6748    
cufflinks 10.4236 0.0 24.4195    
cufflinks 7.5561 0.0 18.2431   Low
cufflinks 17.474 0.0 39.4225    
cufflinks 11.6442 0.0 26.8322    

0 Strain