Gene : Eucgr.C01785 E. grandis v2.0
Defline:  (1 of 1) KOG0865//KOG0879//KOG0880 - Cyclophilin type peptidyl-prolyl cis-trans isomerase // U-snRNP-associated cyclophilin type peptidyl-prolyl cis-trans isomerase // Peptidyl-prolyl cis-trans isomerase Genomic Order:  1332
Name:  ? Eucgr.C01785 Secondary Identifier:  ? PAC:32038279
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.C01785 0.5kb upstream 0.5kb upstream 10005 true Chr03: 28781283-28791287 Eucalyptus grandis
Eucgr.C01785 0.5kb upstream 0.5kb upstream 500 false Chr03: 28781283-28781782 Eucalyptus grandis
Eucgr.C01785 0.5kb downstream 0.5kb downstream 10005 true Chr03: 28781783-28791787 Eucalyptus grandis
Eucgr.C01785 0.5kb downstream 0.5kb downstream 500 false Chr03: 28791288-28791787 Eucalyptus grandis
Eucgr.C01785 1.0kb upstream 1.0kb upstream 10505 true Chr03: 28780783-28791287 Eucalyptus grandis
Eucgr.C01785 1.0kb upstream 1.0kb upstream 1000 false Chr03: 28780783-28781782 Eucalyptus grandis
Eucgr.C01785 1.0kb downstream 1.0kb downstream 10505 true Chr03: 28781783-28792287 Eucalyptus grandis
Eucgr.C01785 1.0kb downstream 1.0kb downstream 1000 false Chr03: 28791288-28792287 Eucalyptus grandis
Eucgr.C01785 2.0kb upstream 2.0kb upstream 11505 true Chr03: 28779783-28791287 Eucalyptus grandis
Eucgr.C01785 2.0kb upstream 2.0kb upstream 2000 false Chr03: 28779783-28781782 Eucalyptus grandis
Eucgr.C01785 2.0kb downstream 2.0kb downstream 11505 true Chr03: 28781783-28793287 Eucalyptus grandis
Eucgr.C01785 2.0kb downstream 2.0kb downstream 2000 false Chr03: 28791288-28793287 Eucalyptus grandis
Eucgr.C01785 5.0kb upstream 5.0kb upstream 14505 true Chr03: 28776783-28791287 Eucalyptus grandis
Eucgr.C01785 5.0kb upstream 5.0kb upstream 5000 false Chr03: 28776783-28781782 Eucalyptus grandis
Eucgr.C01785 5.0kb downstream 5.0kb downstream 14505 true Chr03: 28781783-28796287 Eucalyptus grandis
Eucgr.C01785 5.0kb downstream 5.0kb downstream 5000 false Chr03: 28791288-28796287 Eucalyptus grandis
Eucgr.C01785 10.0kb upstream 10.0kb upstream 19505 true Chr03: 28771783-28791287 Eucalyptus grandis
Eucgr.C01785 10.0kb upstream 10.0kb upstream 10000 false Chr03: 28771783-28781782 Eucalyptus grandis
Eucgr.C01785 10.0kb downstream 10.0kb downstream 19505 true Chr03: 28781783-28801287 Eucalyptus grandis
Eucgr.C01785 10.0kb downstream 10.0kb downstream 10000 false Chr03: 28791288-28801287 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040927 5273 Angiosperm View MSA
124061433 5270 Rosid View MSA
123740248 5271 Pentapetalae View MSA
122791283 5272 Eudicot View MSA
123428973 5275 Viridiplantae View MSA
121347265 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 29.6598 0.0 80.7975 High  
cufflinks 31.1469 0.0 81.1831    
cufflinks 31.3793 0.0 104.013 High  
cufflinks 28.1349 0.0 78.766    
cufflinks 19.9907 0.0 51.2404   Low
cufflinks 27.9892 0.0 64.3823    

0 Strain