Gene : Eucgr.C01576 E. grandis v2.0
Defline:  (1 of 1) PTHR24058:SF44 - SERINE/THREONINE-PROTEIN KINASE AFC1 Genomic Order:  1262
Name:  ? Eucgr.C01576 Secondary Identifier:  ? PAC:32039997
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.C01576 0.5kb upstream 0.5kb upstream 5498 true Chr03: 26217591-26223088 Eucalyptus grandis
Eucgr.C01576 0.5kb upstream 0.5kb upstream 500 false Chr03: 26217591-26218090 Eucalyptus grandis
Eucgr.C01576 0.5kb downstream 0.5kb downstream 5498 true Chr03: 26218091-26223588 Eucalyptus grandis
Eucgr.C01576 0.5kb downstream 0.5kb downstream 500 false Chr03: 26223089-26223588 Eucalyptus grandis
Eucgr.C01576 1.0kb upstream 1.0kb upstream 5998 true Chr03: 26217091-26223088 Eucalyptus grandis
Eucgr.C01576 1.0kb upstream 1.0kb upstream 1000 false Chr03: 26217091-26218090 Eucalyptus grandis
Eucgr.C01576 1.0kb downstream 1.0kb downstream 5998 true Chr03: 26218091-26224088 Eucalyptus grandis
Eucgr.C01576 1.0kb downstream 1.0kb downstream 1000 false Chr03: 26223089-26224088 Eucalyptus grandis
Eucgr.C01576 2.0kb upstream 2.0kb upstream 6998 true Chr03: 26216091-26223088 Eucalyptus grandis
Eucgr.C01576 2.0kb upstream 2.0kb upstream 2000 false Chr03: 26216091-26218090 Eucalyptus grandis
Eucgr.C01576 2.0kb downstream 2.0kb downstream 6998 true Chr03: 26218091-26225088 Eucalyptus grandis
Eucgr.C01576 2.0kb downstream 2.0kb downstream 2000 false Chr03: 26223089-26225088 Eucalyptus grandis
Eucgr.C01576 5.0kb upstream 5.0kb upstream 9998 true Chr03: 26213091-26223088 Eucalyptus grandis
Eucgr.C01576 5.0kb upstream 5.0kb upstream 5000 false Chr03: 26213091-26218090 Eucalyptus grandis
Eucgr.C01576 5.0kb downstream 5.0kb downstream 9998 true Chr03: 26218091-26228088 Eucalyptus grandis
Eucgr.C01576 5.0kb downstream 5.0kb downstream 5000 false Chr03: 26223089-26228088 Eucalyptus grandis
Eucgr.C01576 10.0kb upstream 10.0kb upstream 14998 true Chr03: 26208091-26223088 Eucalyptus grandis
Eucgr.C01576 10.0kb upstream 10.0kb upstream 10000 false Chr03: 26208091-26218090 Eucalyptus grandis
Eucgr.C01576 10.0kb downstream 10.0kb downstream 14998 true Chr03: 26218091-26233088 Eucalyptus grandis
Eucgr.C01576 10.0kb downstream 10.0kb downstream 10000 false Chr03: 26223089-26233088 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124060771 5270 Rosid View MSA
123738736 5271 Pentapetalae View MSA
122792665 5272 Eudicot View MSA
122044731 5273 Angiosperm View MSA
121349585 5274 Embryophyte View MSA
123426533 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.0112 0.0 24.9506    
cufflinks 7.37951 0.0 17.1339   Low
cufflinks 13.2614 0.0 35.983    
cufflinks 17.773 0.0 45.8553   High
cufflinks 7.61548 0.0 17.746    
cufflinks 10.3002 0.0 26.104    

0 Strain