Gene : Eucgr.C02546 E. grandis v2.0
Defline:  (1 of 7) PF05757 - Oxygen evolving enhancer protein 3 (PsbQ) (PsbQ) Genomic Order:  2056
Name:  ? Eucgr.C02546 Secondary Identifier:  ? PAC:32036178
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.C02546 0.5kb upstream 0.5kb upstream 1040 true Chr03: 50657464-50658503 Eucalyptus grandis
Eucgr.C02546 0.5kb upstream 0.5kb upstream 500 false Chr03: 50658004-50658503 Eucalyptus grandis
Eucgr.C02546 0.5kb downstream 0.5kb downstream 1040 true Chr03: 50656964-50658003 Eucalyptus grandis
Eucgr.C02546 0.5kb downstream 0.5kb downstream 500 false Chr03: 50656964-50657463 Eucalyptus grandis
Eucgr.C02546 1.0kb upstream 1.0kb upstream 1540 true Chr03: 50657464-50659003 Eucalyptus grandis
Eucgr.C02546 1.0kb upstream 1.0kb upstream 1000 false Chr03: 50658004-50659003 Eucalyptus grandis
Eucgr.C02546 1.0kb downstream 1.0kb downstream 1540 true Chr03: 50656464-50658003 Eucalyptus grandis
Eucgr.C02546 1.0kb downstream 1.0kb downstream 1000 false Chr03: 50656464-50657463 Eucalyptus grandis
Eucgr.C02546 2.0kb upstream 2.0kb upstream 2540 true Chr03: 50657464-50660003 Eucalyptus grandis
Eucgr.C02546 2.0kb upstream 2.0kb upstream 2000 false Chr03: 50658004-50660003 Eucalyptus grandis
Eucgr.C02546 2.0kb downstream 2.0kb downstream 2540 true Chr03: 50655464-50658003 Eucalyptus grandis
Eucgr.C02546 2.0kb downstream 2.0kb downstream 2000 false Chr03: 50655464-50657463 Eucalyptus grandis
Eucgr.C02546 5.0kb upstream 5.0kb upstream 5540 true Chr03: 50657464-50663003 Eucalyptus grandis
Eucgr.C02546 5.0kb upstream 5.0kb upstream 5000 false Chr03: 50658004-50663003 Eucalyptus grandis
Eucgr.C02546 5.0kb downstream 5.0kb downstream 5540 true Chr03: 50652464-50658003 Eucalyptus grandis
Eucgr.C02546 5.0kb downstream 5.0kb downstream 5000 false Chr03: 50652464-50657463 Eucalyptus grandis
Eucgr.C02546 10.0kb upstream 10.0kb upstream 10540 true Chr03: 50657464-50668003 Eucalyptus grandis
Eucgr.C02546 10.0kb upstream 10.0kb upstream 10000 false Chr03: 50658004-50668003 Eucalyptus grandis
Eucgr.C02546 10.0kb downstream 10.0kb downstream 10540 true Chr03: 50647464-50658003 Eucalyptus grandis
Eucgr.C02546 10.0kb downstream 10.0kb downstream 10000 false Chr03: 50647464-50657463 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124068012 5270 Rosid View MSA
123738573 5271 Pentapetalae View MSA
122791762 5272 Eudicot View MSA
122049164 5273 Angiosperm View MSA
121311275 5274 Embryophyte View MSA
123348590 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.97708 0.0 3.45598    
cufflinks 1.29652 0.0 4.47862    
cufflinks 0.415004 0.0 1.78389    
cufflinks 0.126935 0.0 0.897864 Low Low
cufflinks 0.769813 0.0 2.84906    
cufflinks 2.55785 0.0 7.89065   High

0 Strain