Gene : Eucgr.C02437 E. grandis v2.0
Defline:  (1 of 31) PF00504 - Chlorophyll A-B binding protein (Chloroa_b-bind) Genomic Order:  1933
Name:  ? Eucgr.C02437 Secondary Identifier:  ? PAC:32036484
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.C02437 0.5kb upstream 0.5kb upstream 5142 true Chr03: 47736735-47741876 Eucalyptus grandis
Eucgr.C02437 0.5kb upstream 0.5kb upstream 500 false Chr03: 47736735-47737234 Eucalyptus grandis
Eucgr.C02437 0.5kb downstream 0.5kb downstream 5142 true Chr03: 47737235-47742376 Eucalyptus grandis
Eucgr.C02437 0.5kb downstream 0.5kb downstream 500 false Chr03: 47741877-47742376 Eucalyptus grandis
Eucgr.C02437 1.0kb upstream 1.0kb upstream 5642 true Chr03: 47736235-47741876 Eucalyptus grandis
Eucgr.C02437 1.0kb upstream 1.0kb upstream 1000 false Chr03: 47736235-47737234 Eucalyptus grandis
Eucgr.C02437 1.0kb downstream 1.0kb downstream 5642 true Chr03: 47737235-47742876 Eucalyptus grandis
Eucgr.C02437 1.0kb downstream 1.0kb downstream 1000 false Chr03: 47741877-47742876 Eucalyptus grandis
Eucgr.C02437 2.0kb upstream 2.0kb upstream 6642 true Chr03: 47735235-47741876 Eucalyptus grandis
Eucgr.C02437 2.0kb upstream 2.0kb upstream 2000 false Chr03: 47735235-47737234 Eucalyptus grandis
Eucgr.C02437 2.0kb downstream 2.0kb downstream 6642 true Chr03: 47737235-47743876 Eucalyptus grandis
Eucgr.C02437 2.0kb downstream 2.0kb downstream 2000 false Chr03: 47741877-47743876 Eucalyptus grandis
Eucgr.C02437 5.0kb upstream 5.0kb upstream 9642 true Chr03: 47732235-47741876 Eucalyptus grandis
Eucgr.C02437 5.0kb upstream 5.0kb upstream 5000 false Chr03: 47732235-47737234 Eucalyptus grandis
Eucgr.C02437 5.0kb downstream 5.0kb downstream 9642 true Chr03: 47737235-47746876 Eucalyptus grandis
Eucgr.C02437 5.0kb downstream 5.0kb downstream 5000 false Chr03: 47741877-47746876 Eucalyptus grandis
Eucgr.C02437 10.0kb upstream 10.0kb upstream 14642 true Chr03: 47727235-47741876 Eucalyptus grandis
Eucgr.C02437 10.0kb upstream 10.0kb upstream 10000 false Chr03: 47727235-47737234 Eucalyptus grandis
Eucgr.C02437 10.0kb downstream 10.0kb downstream 14642 true Chr03: 47737235-47751876 Eucalyptus grandis
Eucgr.C02437 10.0kb downstream 10.0kb downstream 10000 false Chr03: 47741877-47751876 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124068052 5270 Rosid View MSA
123740646 5271 Pentapetalae View MSA
122791175 5272 Eudicot View MSA
122046459 5273 Angiosperm View MSA
121346788 5274 Embryophyte View MSA
123380445 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.25922 0.0 12.3794    
cufflinks 3.72448 0.0 10.8675    
cufflinks 4.68432 0.0 13.4086    
cufflinks 6.75759 0.0 18.484    
cufflinks 5.47987 0.0 15.4268    
cufflinks 22.4833 0.0 52.5525   High

0 Strain