Gene : Eucgr.C02304 E. grandis v2.0
Defline:  (1 of 10) PF12854//PF13041 - PPR repeat (PPR_1) // PPR repeat family (PPR_2) Genomic Order:  1858
Name:  ? Eucgr.C02304 Secondary Identifier:  ? PAC:32036045
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.C02304 0.5kb upstream 0.5kb upstream 3220 true Chr03: 45246893-45250112 Eucalyptus grandis
Eucgr.C02304 0.5kb upstream 0.5kb upstream 500 false Chr03: 45249613-45250112 Eucalyptus grandis
Eucgr.C02304 0.5kb downstream 0.5kb downstream 3220 true Chr03: 45246393-45249612 Eucalyptus grandis
Eucgr.C02304 0.5kb downstream 0.5kb downstream 500 false Chr03: 45246393-45246892 Eucalyptus grandis
Eucgr.C02304 1.0kb upstream 1.0kb upstream 3720 true Chr03: 45246893-45250612 Eucalyptus grandis
Eucgr.C02304 1.0kb upstream 1.0kb upstream 1000 false Chr03: 45249613-45250612 Eucalyptus grandis
Eucgr.C02304 1.0kb downstream 1.0kb downstream 3720 true Chr03: 45245893-45249612 Eucalyptus grandis
Eucgr.C02304 1.0kb downstream 1.0kb downstream 1000 false Chr03: 45245893-45246892 Eucalyptus grandis
Eucgr.C02304 2.0kb upstream 2.0kb upstream 4720 true Chr03: 45246893-45251612 Eucalyptus grandis
Eucgr.C02304 2.0kb upstream 2.0kb upstream 2000 false Chr03: 45249613-45251612 Eucalyptus grandis
Eucgr.C02304 2.0kb downstream 2.0kb downstream 4720 true Chr03: 45244893-45249612 Eucalyptus grandis
Eucgr.C02304 2.0kb downstream 2.0kb downstream 2000 false Chr03: 45244893-45246892 Eucalyptus grandis
Eucgr.C02304 5.0kb upstream 5.0kb upstream 7720 true Chr03: 45246893-45254612 Eucalyptus grandis
Eucgr.C02304 5.0kb upstream 5.0kb upstream 5000 false Chr03: 45249613-45254612 Eucalyptus grandis
Eucgr.C02304 5.0kb downstream 5.0kb downstream 7720 true Chr03: 45241893-45249612 Eucalyptus grandis
Eucgr.C02304 5.0kb downstream 5.0kb downstream 5000 false Chr03: 45241893-45246892 Eucalyptus grandis
Eucgr.C02304 10.0kb upstream 10.0kb upstream 12720 true Chr03: 45246893-45259612 Eucalyptus grandis
Eucgr.C02304 10.0kb upstream 10.0kb upstream 10000 false Chr03: 45249613-45259612 Eucalyptus grandis
Eucgr.C02304 10.0kb downstream 10.0kb downstream 12720 true Chr03: 45236893-45249612 Eucalyptus grandis
Eucgr.C02304 10.0kb downstream 10.0kb downstream 10000 false Chr03: 45236893-45246892 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124068805 5270 Rosid View MSA
123753317 5271 Pentapetalae View MSA
122792715 5272 Eudicot View MSA
122046595 5273 Angiosperm View MSA
121310630 5274 Embryophyte View MSA
123348065 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.60588 0.0 13.0674    
cufflinks 5.64971 0.0 13.0644    
cufflinks 4.61691 0.0 10.8816    
cufflinks 3.27073 0.0 7.90973    
cufflinks 1.81749 0.0 4.70627   Low
cufflinks 7.90381 0.0 18.0551   High

0 Strain