Gene : Eucgr.C02168 E. grandis v2.0
Defline:  (1 of 1) PF04192 - Utp21 specific WD40 associated putative domain (Utp21) Genomic Order:  1715
Name:  ? Eucgr.C02168 Secondary Identifier:  ? PAC:32040011
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

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Gene Structure Displayer

Expression

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Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.C02168 0.5kb upstream 0.5kb upstream 15831 true Chr03: 40305068-40320898 Eucalyptus grandis
Eucgr.C02168 0.5kb upstream 0.5kb upstream 500 false Chr03: 40320399-40320898 Eucalyptus grandis
Eucgr.C02168 0.5kb downstream 0.5kb downstream 15831 true Chr03: 40304568-40320398 Eucalyptus grandis
Eucgr.C02168 0.5kb downstream 0.5kb downstream 500 false Chr03: 40304568-40305067 Eucalyptus grandis
Eucgr.C02168 1.0kb upstream 1.0kb upstream 16331 true Chr03: 40305068-40321398 Eucalyptus grandis
Eucgr.C02168 1.0kb upstream 1.0kb upstream 1000 false Chr03: 40320399-40321398 Eucalyptus grandis
Eucgr.C02168 1.0kb downstream 1.0kb downstream 16331 true Chr03: 40304068-40320398 Eucalyptus grandis
Eucgr.C02168 1.0kb downstream 1.0kb downstream 1000 false Chr03: 40304068-40305067 Eucalyptus grandis
Eucgr.C02168 2.0kb upstream 2.0kb upstream 17331 true Chr03: 40305068-40322398 Eucalyptus grandis
Eucgr.C02168 2.0kb upstream 2.0kb upstream 2000 false Chr03: 40320399-40322398 Eucalyptus grandis
Eucgr.C02168 2.0kb downstream 2.0kb downstream 17331 true Chr03: 40303068-40320398 Eucalyptus grandis
Eucgr.C02168 2.0kb downstream 2.0kb downstream 2000 false Chr03: 40303068-40305067 Eucalyptus grandis
Eucgr.C02168 5.0kb upstream 5.0kb upstream 20331 true Chr03: 40305068-40325398 Eucalyptus grandis
Eucgr.C02168 5.0kb upstream 5.0kb upstream 5000 false Chr03: 40320399-40325398 Eucalyptus grandis
Eucgr.C02168 5.0kb downstream 5.0kb downstream 20331 true Chr03: 40300068-40320398 Eucalyptus grandis
Eucgr.C02168 5.0kb downstream 5.0kb downstream 5000 false Chr03: 40300068-40305067 Eucalyptus grandis
Eucgr.C02168 10.0kb upstream 10.0kb upstream 25331 true Chr03: 40305068-40330398 Eucalyptus grandis
Eucgr.C02168 10.0kb upstream 10.0kb upstream 10000 false Chr03: 40320399-40330398 Eucalyptus grandis
Eucgr.C02168 10.0kb downstream 10.0kb downstream 25331 true Chr03: 40295068-40320398 Eucalyptus grandis
Eucgr.C02168 10.0kb downstream 10.0kb downstream 10000 false Chr03: 40295068-40305067 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124065336 5270 Rosid View MSA
123738219 5271 Pentapetalae View MSA
122786158 5272 Eudicot View MSA
122041805 5273 Angiosperm View MSA
121346831 5274 Embryophyte View MSA
123424252 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.14574 0.0 9.79586    
cufflinks 4.93569 0.0 11.381    
cufflinks 5.0397 0.0 12.5491    
cufflinks 2.13616 0.0 6.28739   Low
cufflinks 4.04827 0.0 9.54015    
cufflinks 9.01126 0.0 22.76   High

0 Strain