Gene : Eucgr.C03058 E. grandis v2.0
Defline:  (1 of 8) PF05653 - Magnesium transporter NIPA (Mg_trans_NIPA) Genomic Order:  2490
Name:  ? Eucgr.C03058 Secondary Identifier:  ? PAC:32038217
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.C03058 0.5kb upstream 0.5kb upstream 5199 true Chr03: 61389616-61394814 Eucalyptus grandis
Eucgr.C03058 0.5kb upstream 0.5kb upstream 500 false Chr03: 61394315-61394814 Eucalyptus grandis
Eucgr.C03058 0.5kb downstream 0.5kb downstream 5199 true Chr03: 61389116-61394314 Eucalyptus grandis
Eucgr.C03058 0.5kb downstream 0.5kb downstream 500 false Chr03: 61389116-61389615 Eucalyptus grandis
Eucgr.C03058 1.0kb upstream 1.0kb upstream 5699 true Chr03: 61389616-61395314 Eucalyptus grandis
Eucgr.C03058 1.0kb upstream 1.0kb upstream 1000 false Chr03: 61394315-61395314 Eucalyptus grandis
Eucgr.C03058 1.0kb downstream 1.0kb downstream 5699 true Chr03: 61388616-61394314 Eucalyptus grandis
Eucgr.C03058 1.0kb downstream 1.0kb downstream 1000 false Chr03: 61388616-61389615 Eucalyptus grandis
Eucgr.C03058 2.0kb upstream 2.0kb upstream 6699 true Chr03: 61389616-61396314 Eucalyptus grandis
Eucgr.C03058 2.0kb upstream 2.0kb upstream 2000 false Chr03: 61394315-61396314 Eucalyptus grandis
Eucgr.C03058 2.0kb downstream 2.0kb downstream 6699 true Chr03: 61387616-61394314 Eucalyptus grandis
Eucgr.C03058 2.0kb downstream 2.0kb downstream 2000 false Chr03: 61387616-61389615 Eucalyptus grandis
Eucgr.C03058 5.0kb upstream 5.0kb upstream 9699 true Chr03: 61389616-61399314 Eucalyptus grandis
Eucgr.C03058 5.0kb upstream 5.0kb upstream 5000 false Chr03: 61394315-61399314 Eucalyptus grandis
Eucgr.C03058 5.0kb downstream 5.0kb downstream 9699 true Chr03: 61384616-61394314 Eucalyptus grandis
Eucgr.C03058 5.0kb downstream 5.0kb downstream 5000 false Chr03: 61384616-61389615 Eucalyptus grandis
Eucgr.C03058 10.0kb upstream 10.0kb upstream 14699 true Chr03: 61389616-61404314 Eucalyptus grandis
Eucgr.C03058 10.0kb upstream 10.0kb upstream 10000 false Chr03: 61394315-61404314 Eucalyptus grandis
Eucgr.C03058 10.0kb downstream 10.0kb downstream 14699 true Chr03: 61379616-61394314 Eucalyptus grandis
Eucgr.C03058 10.0kb downstream 10.0kb downstream 10000 false Chr03: 61379616-61389615 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124065419 5270 Rosid View MSA
123737318 5271 Pentapetalae View MSA
122791606 5272 Eudicot View MSA
122046404 5273 Angiosperm View MSA
121346413 5274 Embryophyte View MSA
123423946 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.45075 0.0 9.00063    
cufflinks 8.31834 0.0 19.7162   High
cufflinks 2.93227 0.0 7.73634    
cufflinks 10.2619 0.0 23.8558   High
cufflinks 4.35936 0.0 11.0795    
cufflinks 3.1657 0.0 8.35846    

0 Strain