Gene : Eucgr.C02997 E. grandis v2.0
Defline:  (1 of 1) K12125 - protein EARLY FLOWERING 3 Genomic Order:  2443
Name:  ? Eucgr.C02997 Secondary Identifier:  ? PAC:32039148
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.C02997 0.5kb upstream 0.5kb upstream 5854 true Chr03: 60476215-60482068 Eucalyptus grandis
Eucgr.C02997 0.5kb upstream 0.5kb upstream 500 false Chr03: 60476215-60476714 Eucalyptus grandis
Eucgr.C02997 0.5kb downstream 0.5kb downstream 5854 true Chr03: 60476715-60482568 Eucalyptus grandis
Eucgr.C02997 0.5kb downstream 0.5kb downstream 500 false Chr03: 60482069-60482568 Eucalyptus grandis
Eucgr.C02997 1.0kb upstream 1.0kb upstream 6354 true Chr03: 60475715-60482068 Eucalyptus grandis
Eucgr.C02997 1.0kb upstream 1.0kb upstream 1000 false Chr03: 60475715-60476714 Eucalyptus grandis
Eucgr.C02997 1.0kb downstream 1.0kb downstream 6354 true Chr03: 60476715-60483068 Eucalyptus grandis
Eucgr.C02997 1.0kb downstream 1.0kb downstream 1000 false Chr03: 60482069-60483068 Eucalyptus grandis
Eucgr.C02997 2.0kb upstream 2.0kb upstream 7354 true Chr03: 60474715-60482068 Eucalyptus grandis
Eucgr.C02997 2.0kb upstream 2.0kb upstream 2000 false Chr03: 60474715-60476714 Eucalyptus grandis
Eucgr.C02997 2.0kb downstream 2.0kb downstream 7354 true Chr03: 60476715-60484068 Eucalyptus grandis
Eucgr.C02997 2.0kb downstream 2.0kb downstream 2000 false Chr03: 60482069-60484068 Eucalyptus grandis
Eucgr.C02997 5.0kb upstream 5.0kb upstream 10354 true Chr03: 60471715-60482068 Eucalyptus grandis
Eucgr.C02997 5.0kb upstream 5.0kb upstream 5000 false Chr03: 60471715-60476714 Eucalyptus grandis
Eucgr.C02997 5.0kb downstream 5.0kb downstream 10354 true Chr03: 60476715-60487068 Eucalyptus grandis
Eucgr.C02997 5.0kb downstream 5.0kb downstream 5000 false Chr03: 60482069-60487068 Eucalyptus grandis
Eucgr.C02997 10.0kb upstream 10.0kb upstream 15354 true Chr03: 60466715-60482068 Eucalyptus grandis
Eucgr.C02997 10.0kb upstream 10.0kb upstream 10000 false Chr03: 60466715-60476714 Eucalyptus grandis
Eucgr.C02997 10.0kb downstream 10.0kb downstream 15354 true Chr03: 60476715-60492068 Eucalyptus grandis
Eucgr.C02997 10.0kb downstream 10.0kb downstream 10000 false Chr03: 60482069-60492068 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124071157 5270 Rosid View MSA
123751825 5271 Pentapetalae View MSA
122796680 5272 Eudicot View MSA
122044272 5273 Angiosperm View MSA
121350755 5274 Embryophyte View MSA
123381878 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.6461 0.0 30.1977    
cufflinks 6.48459 0.0 14.703   Low
cufflinks 15.9043 0.0 35.172    
cufflinks 9.46271 0.0 21.072    
cufflinks 10.4512 0.0 23.2164    
cufflinks 15.5645 0.0 34.4211    

0 Strain